Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0772 ATGAGCAACGCATATGTTAGCTCAACAATATATGCTGTTAGGTGTAAAGAACCATTCTCATTATCTTTCAATGGCTACTCAAACTTCTGTTACGAAAGATTTGACAGAACCGCATCATACTGTTTGTCATGCTGTGGTTGTTGTGATTTCTGTTCAGTCTCCACTTACAGAGTACCCATAAAACCTTGTCTTATAAATGGGTTGAGGCAATCTGCTCTTCTTCAATTGTCGGCATCTAGAAGGTTGATATTGGGTGGTGGAGACCATTACCTTCCCCGGCTACCAGCTTATGGTGTCCTCAGAGGTTGTCAGGAGCTTAATTCTTCTGTCAATGAGAGAACTGTTTACAATAATAGTAGATGGAGAATAAAGGGAAGATGTATTTGTGCTACTTCCCCGAAAGGGAGAGAATTTTCCCATTCATTTGGTTCTGATGATGCTGAAGCAGTTCTCAGCTTGTTGAGTGAGGAGGCAGATAAGGATGCTATTGGTAGCAAATGTAAGAATGCATCTTCATCAAAAAGAGTGGAAGTTGAGAAGAAAAGAAAAAATCTGAGCAGAGAGAGACATTTTAGTTCAAGTGAGAAAGTAGAAACAGAGAAAAATGGAAATTTGAAGCGACATGAATCATCCACCATAGACTTGAGAAGAGAATATGGAAAAGCCAACAAAGAAAGGGAAGCCTTTGCAAAAAGTGAAAACCATAGGAAACGAAGAGATGCATCTAGTTGTTCATCTTATTACTCTCTCTCATCAGGAGATTTTGGGAGTGAGCTGGAAGTTCAGGATGAGATTGGTTTGGAAGAGTCGTCACTGGAATATGAGAAGGATGAAGCGAATCATCTGGAGGAACAAGTAAAGGAAGAATTCAACAGGCAAGGGGATGACTCAAAGAAGCTGCAGGCTGTTTCAAATAAGCGAAGAATTGCATTTGGTGTGGATATTGATTGGAACCTAAGGAACAAGTCTGAAAAGAAGCTGACTGAGGGAACTCTGCAAAACACTGAATCCACAAGAGAACAACAGGACATGCATTCAAGAGAATTTAGAACACTTGAATCTGGTCATAAAAAATCATCTATTTCACAAAAGCGAGTCAATATTGAGGATGATAAATCATCTTGTGTTGTCAATTTGGATAAGAAAACTAACAAAGCATATATTCAAACTGAGTCTGGTTGTGATGAAGTTGAGACAATTTTGTTATCACAAAAGGAATTCAGTGGCAGGGAAGGGAAGCTTGAGATATCAGAAACAATTTTGAACGAAACAACTGATAAACATAAAAAGTTTGTTAGTTCAACTTCTACCACAGGAAAGCAAACTTTGACATCAAAGAAGGTATTCAGTGGCAGGGAAGGGAACCTTGCAATATCAGAAACACTTTTACAAGAAACAAATGATAAACATAAAAAAATTGTTGGTTCTACTTCTACCACTGGAAAGAATGTGATAGATAGAAGTTCCCAGAAATATACTGGAAATTTAAAAATTGAAGACACTGAAAGGACCTCAAATACTAGGATGAAGGACATGGAAGTGAAAAAAGATTCAGTTTTGAGTTCTGTTCAGGGAGTGGAGGAGCAGCAATACCAAAAAGGAGAGAAGATCATTAAGGTGAAGGATAAAGAGAGAAGAAAAAAATCTGAACAATTTTCTGAAGTATCAGAAGCTCACAAGATCAATGTTGAAGATACATCTAGCATAAAGTCTAGAACTAGATTAATGAACATGGAAGAAAAATCGAACATAAGCTCAGATGCAAGGGTTACGTGGCTCCAAACAGATAAAAGGACAACTCAGAGTTTCCAACACAGGAAAGGATCTGAACTTGTCAGCACTTTATCAGAAGGCTATGCCAGTGATGAAAAGCAAGTTTCAAGTTCTCAAAAAGCTTATGAGAAGGTGAGATTAATTCCAAAAAGTAAATCAACATCAGTTGTTAGAACTAGAGAAAGTTCTAGCCAAACTGATGAAAGGATTGCAAATTTTGAATTGGCCAGAGACGACCAAAGATCTAGCAACCTTTCAATTTCTGATGAAACTACCTCAAGAGAGGAATCCAGCTCCCAGGGATCATTGAATTTGATTTCTGGGGCTGGAAAACATATTATATTAGCATCAGGTGAAAAAAGGAGGCCTGCAACAATGTTGATCCCTTCCTCTTCTGAAATTGGTGGAGACTCAGCACATGTTGAACTCACTGCAGGAATTGCAAGCCCTGAGATCTTCCTTGGAACTTCAGAAAGTGGCTCTTCTGCTTTGTATGACAATTCAGGAAGAAGGTCTGCTTTGCATCCAGATGCTATTGATTCAGCTGATCGTTTAGAGAAGTCATCTAGACAGTTTGTTGATGAGTTTGCTGAGAGGATCAGGCATGAAGTAACGACTTCAGAAGCACAAGAGATGGAAGTTACAGGAACAAAATTGAATCTTGAAGTTGGGGGTGATCAGATCTACAGCTCAAGGCAACAAGGCACTCAAAATGGTGCTCAGTCAAAGGAGCATGATTCTAGTCGTTCCTCTGGGTTTCCTGGGACCAAAGGACCTTCTGATGAGATGTGGGATGTCACAGAACCATCTGCTGAGCAAGTTCTAGTAGCCAAAGAAACAGAGATCAGCAAGGAAACTGGGAAAGCAGTTGTTACTAGAACTGGGAGGTCCTTATGGGGTATGATTGCTGATATTGTTCGATTACGTTGGGGTTCACGTGCTGGTTCCTCCACTTCTGCTGAGAGAAATTCACCAAACAAGTCTGACAGTGACACATGGTTTTCTGGGCAGGAGCATGAGGAAACCACTAAAACTAATGTCATAAAAGAAACAAGTGTACCACCACAAGCCATGACTTTTGATAAGTTAAAACCGGGTAAACATTATACCCAAAGTGAGGGAGAGGTGTCCGACAATACAAAACTGAAGGACAAAGGAAAAAATGTTGAAGTTGGATTGTCATCCCCAAATACATTGGAAAGTGGATCAATGTTAGTAGGCGTATCTTACACTTCTGGAGAGGAAAATGCTAGTTGGACTGAAGATAAAAAAAATTTGAAAGTCAATACTTCTGGCACTCAAAACATGGAATTACCAATTTCAGTACCTGCCAGAGGGCCTTCTATTGTTGGAGAAATTATAAGCATTGGTGGATCTGACATGTCTGGAGCTGAATCAGTGGTTCCAATCAAGGAATCTGTTGCTCCTGGGCAGTCTGAATTGTCCGGCTCAGAGAGAAAGGATGGAGAGTTGAAGCAAAGGAAGTTTCAACGGAACAGGCAAGTCTTAAGAGATAGGTTTGATGACTGGGAAGAAGCCTATCAACGTGAACTTGAGCAGCGAAGAGTAGATGAAATGTTCATGAAGGAAGCACTTTTGGAAGCCAAGAAGGCTGCTGATACATGGGAGGTACCTGTTGGAGCTGTTCTTGTGCAGCATGGGAAAATTATTGCCCGAGGCTGCAACTTAGTAGAAGAGTTACGGGACTCCACTGCCCATGCAGAGATGATTTGTATACGAGAAGCTTCAAACCTTCTCCGATCATGGAGACTATCAGACACTACACTTTATGTAACGCTTGAGCCATGTCCAATGTGTGCTGGTGCTATCCTGCAGGCAAGAGTAGACACTGTTGTGTGGGGTGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGAATTTTCCCTGATGGAGGAGAAAATGTATCAGAACAAAGAGATATACCTCCTGCCCCAGTTCATCCATTCCATCCAAACATGAAAATAAGAAGAGGGGTCTTGGCCACTGAGTGTGCGGATGCAATGCAACAATTCTTTCAGCTAAGAAGGAAAAAGAAGAAAGAGGAACCGTCAAATGACCCTTCTTGCCTTCCTGTTACTCACCACCCCTCCAAGTTACTCAACAAGATACATGACGTCTTCCACATCATGTTTTGTTTGTAA 3942 0.4066 MSNAYVSSTIYAVRCKEPFSLSFNGYSNFCYERFDRTASYCLSCCGCCDFCSVSTYRVPIKPCLINGLRQSALLQLSASRRLILGGGDHYLPRLPAYGVLRGCQELNSSVNERTVYNNSRWRIKGRCICATSPKGREFSHSFGSDDAEAVLSLLSEEADKDAIGSKCKNASSSKRVEVEKKRKNLSRERHFSSSEKVETEKNGNLKRHESSTIDLRREYGKANKEREAFAKSENHRKRRDASSCSSYYSLSSGDFGSELEVQDEIGLEESSLEYEKDEANHLEEQVKEEFNRQGDDSKKLQAVSNKRRIAFGVDIDWNLRNKSEKKLTEGTLQNTESTREQQDMHSREFRTLESGHKKSSISQKRVNIEDDKSSCVVNLDKKTNKAYIQTESGCDEVETILLSQKEFSGREGKLEISETILNETTDKHKKFVSSTSTTGKQTLTSKKVFSGREGNLAISETLLQETNDKHKKIVGSTSTTGKNVIDRSSQKYTGNLKIEDTERTSNTRMKDMEVKKDSVLSSVQGVEEQQYQKGEKIIKVKDKERRKKSEQFSEVSEAHKINVEDTSSIKSRTRLMNMEEKSNISSDARVTWLQTDKRTTQSFQHRKGSELVSTLSEGYASDEKQVSSSQKAYEKVRLIPKSKSTSVVRTRESSSQTDERIANFELARDDQRSSNLSISDETTSREESSSQGSLNLISGAGKHIILASGEKRRPATMLIPSSSEIGGDSAHVELTAGIASPEIFLGTSESGSSALYDNSGRRSALHPDAIDSADRLEKSSRQFVDEFAERIRHEVTTSEAQEMEVTGTKLNLEVGGDQIYSSRQQGTQNGAQSKEHDSSRSSGFPGTKGPSDEMWDVTEPSAEQVLVAKETEISKETGKAVVTRTGRSLWGMIADIVRLRWGSRAGSSTSAERNSPNKSDSDTWFSGQEHEETTKTNVIKETSVPPQAMTFDKLKPGKHYTQSEGEVSDNTKLKDKGKNVEVGLSSPNTLESGSMLVGVSYTSGEENASWTEDKKNLKVNTSGTQNMELPISVPARGPSIVGEIISIGGSDMSGAESVVPIKESVAPGQSELSGSERKDGELKQRKFQRNRQVLRDRFDDWEEAYQRELEQRRVDEMFMKEALLEAKKAADTWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASNLLRSWRLSDTTLYVTLEPCPMCAGAILQARVDTVVWGAPNKLLGADGSWIRIFPDGGENVSEQRDIPPAPVHPFHPNMKIRRGVLATECADAMQQFFQLRRKKKKEEPSNDPSCLPVTHHPSKLLNKIHDVFHIMFCL* 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0772 1313 Gene3D Cytidine Deaminase, domain 2 1103 1288 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 1064 1084 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 173 251 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 823 846 - -
Gso1g0772 1313 Coils Coil 1091 1111 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 905 934 - -
Gso1g0772 1313 Pfam MafB19-like deaminase 1116 1215 IPR028883 GO:0002100|GO:0008251
Gso1g0772 1313 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1113 1235 IPR002125 -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 173 242 - -
Gso1g0772 1313 SUPERFAMILY Cytidine deaminase-like 1112 1280 IPR016193 GO:0003824
Gso1g0772 1313 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 864 1303 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 949 971 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 905 923 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 668 695 - -
Gso1g0772 1313 CDD nucleoside_deaminase 1119 1226 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 823 855 - -
Gso1g0772 1313 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 864 1303 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 326 364 - -
Gso1g0772 1313 Coils Coil 272 292 - -
Gso1g0772 1313 MobiDBLite consensus disorder prediction 340 364 - -
Gso1g0772 1313 Hamap tRNA-specific adenosine deaminase [tadA]. 1119 1276 IPR028883 GO:0002100|GO:0008251
Gso1g0772 1313 MobiDBLite consensus disorder prediction 666 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0772 Gso-Chr1 27256713 27267874 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0772 1 27256713 27267874 Gso2g1072 2 13110196 13115404 GST