Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0765 ATGATGCCTCCTCAGCAAGAAACCTCTATTACATCAAACATTCCGGCCATCACCAACCGGCCCGAAAACAGCTCCGCCCACGCCGAACCACCGGGCTCCGCCACCAACGACATTAAACCCACTTTCACGATCAATGACATTCACAACCATACTTCTCAGAACCACCAAGTAGCTCCTTCAGCACCCAGATTTTCTATTCTTCAGCAATCCTTGCGCCCCGTTACCCTCAAATTTGAGGATGTTTCCTACAGCATAACCTTTGGAAGGGACAATAATGGTTGTGTATCTCCTCAAAAGCCAAAGCACACAAGGACAGTGCTGAATGGTGTGACCGGTATGGTGGGGCCAGGGGAGGTCATGGCAATGTTGGGTCCCTCAGGGAGCGGCAAGACCACCTTACTCACCGCCCTCGCCGGCCGTCTTGACGGAAAACTCTCCGGCGCCATCACGTACAACGGCCACCCTTTCTCCAGCTCCATGAAGAGGAACATAGGGTTTGTGTCCCAAGATGACGTGTTATATCCTCACCTCACTGTGCTTGAGAGTCTAACCTATGCTGCCATGTTGAAACTTCCCAAGAGTTTGACTAGAGAAGAGAAAATGGAACAAGTTGAAATGATCATTGTGGACCTAGGGCTGTCCCGGTGCCGGAACAGCCCTGTTGGTGGTGGAGCCGCCTTGTTTCGGGGGATTTCGGGTGGGGAGCGAAAGCGGGTCAGCATCGGGCAAGAGATGTTGGTGAACCCGAGTTTATTGTTGCTGGATGAGCCAACATCTGGGTTGGACTCCACCACGGCTCAACGCATCATGGCGATGCTCCAAAGCCTCGCCGGAGCTTACCGGACCGTGGTGACTACCATTCACCAGCCCTCAAGCCGGTTGTATTGGATGTTTGATAAGGTGGTGGTGTTGTCGGATGGGTACCCGATTTTTACCGGGCAAACGGATCAAGTCATGGATTATCTTGAGTCCATTGGGTTTGTACCCGTTTTCAATTTCGTGAACCCCGCTGATTTTCTGCTTGACCTTGCTAATGGCATAGTTGCTGATGCCAAACAAGAAGAGCAGATAGATCACCATGAGGATCAAGCTTCAATCAAACAGTTCCTAGTTTCATCATATAAGAAGAACTTATACCCTCTTCTCAAACAAGAGATTCAACAGAATCATAGAGAACTAGCATTTTTAACTTCAGGAGCACCTAGAAGTTCTGAGAACCAATGGACCACTAGCTGGTGGGAGCAATTCATGGTTCTTCTTAAGAGGGGTTTAATGGAAAGGAGGCATGAATCTTATTCGAGATTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTGTGGTGGCATTCTGATCCCTCACATATACACGATCAGGTAGGCCTGCTATTCTTCTTCTCCATCTTCTGGGGGTTCTTCCCTCTCTTCAATGCCGTCTTCGCTTTTCCATTGGAACGACCAATGCTGATGAAAGAAAGATCATCAGGCATGTACCATCTCTCCTCCTACTATGTAGCCAGGATGGTAGGGGACTTACCAATGGAATTTGTGCTTCCCACCATCTTTGTAACCATCTCTTATTGGATGGGTGGACTCAAGCCATCGTTGGTTACATTTGTGTTAACCCTCTTGATCATGCTTTTTAATGTGCTGGTCTCTCAAGGAATAGGCCTTGCACTTGGTGCCATTCTAATGGATGTGAAACAAGCCACAACCTTAGCTTCAGTGACTATGTTGGTGTTTCTTTTGGCTGGAGGTTACTACATTCGGCATATTCCATTCTTTATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTATTGTTATAAGCTTCTTGTAGGAGTGCAGTACTCAGTAAATGAGGTCTATCAGTGTAGACAGGGATTGCATTATAGGATAAGAGATTTTCCTGCCATTAAGTGTCTAGGGCTTGATAGTTTGTGGGGAGATGTGGCTGTTTTGGCTGTAATGTTGATTGGATACAGAGTTGTGGCTTATTTAGCTTTGAGGATGGGGCTGCATCATTGA 2037 0.4723 MMPPQQETSITSNIPAITNRPENSSAHAEPPGSATNDIKPTFTINDIHNHTSQNHQVAPSAPRFSILQQSLRPVTLKFEDVSYSITFGRDNNGCVSPQKPKHTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLDGKLSGAITYNGHPFSSSMKRNIGFVSQDDVLYPHLTVLESLTYAAMLKLPKSLTREEKMEQVEMIIVDLGLSRCRNSPVGGGAALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIMAMLQSLAGAYRTVVTTIHQPSSRLYWMFDKVVVLSDGYPIFTGQTDQVMDYLESIGFVPVFNFVNPADFLLDLANGIVADAKQEEQIDHHEDQASIKQFLVSSYKKNLYPLLKQEIQQNHRELAFLTSGAPRSSENQWTTSWWEQFMVLLKRGLMERRHESYSRLRIFQVLSVSILSGLLWWHSDPSHIHDQVGLLFFFSIFWGFFPLFNAVFAFPLERPMLMKERSSGMYHLSSYYVARMVGDLPMEFVLPTIFVTISYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIRHIPFFIAWLKYISFSHYCYKLLVGVQYSVNEVYQCRQGLHYRIRDFPAIKCLGLDSLWGDVAVLAVMLIGYRVVAYLALRMGLHH* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0765 678 MobiDBLite consensus disorder prediction 1 40 - -
Gso1g0765 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 48 675 - -
Gso1g0765 678 Pfam ABC transporter 107 259 IPR003439 GO:0005524
Gso1g0765 678 Gene3D - 76 325 IPR027417 -
Gso1g0765 678 ProSitePatterns ABC transporters family signature. 231 245 IPR017871 GO:0005524
Gso1g0765 678 SMART AAA_5 116 309 IPR003593 -
Gso1g0765 678 Pfam ABC-2 type transporter 288 375 IPR043926 GO:0140359
Gso1g0765 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 331 IPR003439 GO:0005524
Gso1g0765 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 48 675 - -
Gso1g0765 678 Pfam ABC-2 type transporter 414 620 IPR013525 GO:0016020|GO:0140359
Gso1g0765 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 324 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0765 Gso-Chr1 26857133 26862776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0765 97 324 Calmodulin-binding Proteins AT2G36910 28.936 1.40e-11 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0765 1 26857133 26862776 Gso2g1078 2 13204715 13209807 GST