Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0760 ATGAGGAACTTCAAGGCTGTTGGTCAAGCCATCACTGCTCTCTTCATCATCTCTCTGAGTGCATGGTGTTATGGACAAGTAGAACTTGACATGGCTCCAATGGAGAAGGCAGAGCGGGATGCTCTATACTCCACCATTCAAGGCTTTGTTGGTGATTGGTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGCTGGACTCCTATTCAGGGGGTCTCTTGTGATCTGTTTAATGGATTTTGGTATGTTACTGTCTTGAACATTGGACCAATCCACGATAATTCTCTAAGTTGTGCCAAAATTTTGGAATTCAGACCACAGTTGTTTGAGCTGAAGCACCTTAAAGCTCTATCCCTATTCAAATGCTTTGAATCACAACACAGGCATCAAGTTACCATCCCCAATGCAAACTGGGAAAAGCTTGCTGGCAGCTTAGAATCACTTGAGTTTAGATCAAACAGAGGTCTCATTGGAAAAATTCCTTCAAGTTTTGGTGCCCTCAAGAACCTTCAGTCACTAGTACTATTAGAAAATGGTTTAACAGGTAAAATTCCACCAGATATTGGTAAACTGAACAAGTTGAAGAGGCTTGTTCTTGCTGGAAACCATTTTAGTGGACACATTCCAGATATTTTTAGTGCATTAGGCGAGTTATTAATTCTTGATTTAAGTAGAAATTCACTATCTGGGACTTTACCTTTGACACTTGGAAGCTTAACTTCCCTTTTGAAGCTTGATGTGAGCCATAACCATTTGGAGGGGAATCTGCTGAAAGAATTTGCTTATCTTAAGAATTTGACCCTTATGGACCTTAGGAATAACAGATTCTCTGGAGGGTTGACATTGAGTATTCAAGAGATGTATTCTTTAGAGGAAATGGTTCTGTCCAACAATGCAATAGGTGGGGATATCAGGACCCTTAAGTGGGAAAACCTTCACAACTTGATCATTTTGGATCTCTCTAACATGGGGTTGAAAGGGGAAATTCCTGAGTCTATATCGGAATTAAAGAGGTTGAGGTTTTTAGGCCTTAGTGACAACAACCTCACAGGCAACCTTTCACCAAATCTATCTACTCTTCCTTGTCTCAATGCACTATATGTTAGTGGCAACAATTTGACAGGAGAGCTTAAATTCTCTGTGGAGTTTTATGGAAAAATGAGAACACGTTTTGGGGCCTGGAACAACCCTAGCCTTTGCTACCCTCTTGGAGTAATATCAACAAGTCATGTTCCATATGGGGTAAAACCATGCCAGCAAGAGATCAAATTGCTAAAATCTAATACAACTGATGGGGATGTGAAGAGGACTTTCCATTCCATAGCCTCTTTGAGCCATACTCCTAATTCCTTCTGGTGGATTTTTCTATTTTTTTTAATATCTTATTTAGGTCTTTAA 1398 0.402 MRNFKAVGQAITALFIISLSAWCYGQVELDMAPMEKAERDALYSTIQGFVGDWWNGSDLYPDPCGWTPIQGVSCDLFNGFWYVTVLNIGPIHDNSLSCAKILEFRPQLFELKHLKALSLFKCFESQHRHQVTIPNANWEKLAGSLESLEFRSNRGLIGKIPSSFGALKNLQSLVLLENGLTGKIPPDIGKLNKLKRLVLAGNHFSGHIPDIFSALGELLILDLSRNSLSGTLPLTLGSLTSLLKLDVSHNHLEGNLLKEFAYLKNLTLMDLRNNRFSGGLTLSIQEMYSLEEMVLSNNAIGGDIRTLKWENLHNLIILDLSNMGLKGEIPESISELKRLRFLGLSDNNLTGNLSPNLSTLPCLNALYVSGNNLTGELKFSVEFYGKMRTRFGAWNNPSLCYPLGVISTSHVPYGVKPCQQEIKLLKSNTTDGDVKRTFHSIASLSHTPNSFWWIFLFFLISYLGL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0760 465 PRINTS Leucine-rich repeat signature 218 231 - -
Gso1g0760 465 PRINTS Leucine-rich repeat signature 239 252 - -
Gso1g0760 465 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Gso1g0760 465 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 5 428 - -
Gso1g0760 465 SUPERFAMILY L domain-like 42 377 - -
Gso1g0760 465 Gene3D Ribonuclease Inhibitor 307 403 IPR032675 -
Gso1g0760 465 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 5 428 - -
Gso1g0760 465 Gene3D Ribonuclease Inhibitor 35 306 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0760 Gso-Chr1 26557093 26559831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0760 139 391 Receptor kinase-like Gene Family AT2G15080 27.481 3.88e-13 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0760 1 26557093 26559831 Gso2g0852 2 9661286 9663990 GST