LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso1g0498	ATGGCGTCGCAAATGGCGATCCTCTTCCGCACGCGCACCCTCCTCTCTTCGAAACCCACCACCACCACCCTCATCAAAACCATAACCACATTCCCCTTCCTCTCACAAGAGCCCCAATTAGTGGACTCCACCCCACCACCTTCTTCCTCAACCACCCCTCTCCCTCCCAACCCCGCCTCCGGAAGCCCCCTCTACAACGAAAACTGGCGCAGCCCAATCCCGCCGCCACCGCCCGCTTCCTCCGCCGCCACCTCCCACGCGCTCGCCCCCGTGGGCTTCTACAACCGCGCCACGTCGGAAACATACGACCCCCGCGCCCTCCTCGACCTCTTCGGCGACTGGATGGCCTCGCAGCAGTGGCACGACGTCAAGTTCCTTTTCGAGGCCTGGGTCCGCTCCCTCGATAAGACGGGCAAACCAAACAAGCCCGATGTTAATCTGTTTAATCACTACCTCCGCGCCAACCTTATGCTCGGCGCCTCCGCCGCCGAGCTCCTCGACCTTGTCGCGCAGATGGCGGAGTTCGACGTCGCCCCCAACACCGCGTCGTTCAACCTCGTCCTCAAGGCCATGTGCCAGGCCAAGGAAACCCTCGCCGCTGACAAGCTCCTCCAACGGATGCTGCAGTCAGGAAATGATGCTCTCCCTGATGATGAATCGTATGACTTAGTCATCGGAATGCTCTTTTCCATGGACCAGATTGACACTGCATTCAAATATATAGATTTAATTTTGAAATCTGGTAATGTGTTGTCAATGAAGGTTTTTATGAACTGTGCGGGCAGTTGTGTCAATAAGGGAAGGCTTGATACATTGGTGACAATAATTGAAAGGTGCAGGGCATCAGATCAAAACAAAGCTCTTTGCCCCAACTGGGACTTGTGCAATTTTATTGTTGAAATTGCAACTCGGGAGGATAATAGCAAATTAGCTTTTTATGGCCTGGAGTTTATGGCTAAATGGATTGTAAAGGGTGAACGTCAAAGACCTCCTATATATATTTCTGTAGATGAAGGTTTAGTTCTGTCAGCTCTTTTGACTGCTGGTAGAACCTATAACACTGACCTGCTAGTGGCATCATGGGCTGTTTTGGATCGCTCATTGCGTAAAAAGAAAGCTCCTAATCCAGAGTCATATCTTGGAAAGATATACGCACATGCATCATTGGGGAATCTACAAAAGGCTTTTGGTACTCTGAATGAATATGAGTCAGCTTATGGGGACTCTGGTCAAGAAGCTGAAGACTTGTTCTGCCCATTTACTTCGTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACTCTAGATAATGTTTATTTTCAACTGGAGAATTTAAACCGTGCAGAGCCTCCTTATAAATCTGTAGCTGCACTAAACTGCGTCATTTTAGGATGTGCAAACATATGGGACCTTGATCGTGCTTACCAAACTTTTGAATCAATTGGATCTACTTTTGGGTTGATCCCTGATATTCATTCATACAATGGGTTGATATATGCCTTTGGGAAGCTCAAGAAGACACATGAAGCTACAAGGGTGTTTGAGCACCTAGTGAGTTTGGGTCTGAAGTCTAATGCAAAATCATATTCTCTACTTGTTGATGCCCACCTCATTAACCGGGATGTCAAATCTGCTCTGGCAGTGATTGATGATATGAGAGCTGCTGGATATGAACCATCAAAAGAGATGCTAAAAAAGGTCAGACGGCGATGCACACGAGAAATGGACAATGAAAGTGATGCCAGAGTGCAATCACTGGCTAATTCCTTGAATTACCAATTGGGTTCAGAAAACCGACGGGACATTCTGTTTAATCTTAATTACAGTATGGGTTATGCTTGA	1851	0.4803	MASQMAILFRTRTLLSSKPTTTTLIKTITTFPFLSQEPQLVDSTPPPSSSTTPLPPNPASGSPLYNENWRSPIPPPPPASSAATSHALAPVGFYNRATSETYDPRALLDLFGDWMASQQWHDVKFLFEAWVRSLDKTGKPNKPDVNLFNHYLRANLMLGASAAELLDLVAQMAEFDVAPNTASFNLVLKAMCQAKETLAADKLLQRMLQSGNDALPDDESYDLVIGMLFSMDQIDTAFKYIDLILKSGNVLSMKVFMNCAGSCVNKGRLDTLVTIIERCRASDQNKALCPNWDLCNFIVEIATREDNSKLAFYGLEFMAKWIVKGERQRPPIYISVDEGLVLSALLTAGRTYNTDLLVASWAVLDRSLRKKKAPNPESYLGKIYAHASLGNLQKAFGTLNEYESAYGDSGQEAEDLFCPFTSLHPLVVACSKKGFETLDNVYFQLENLNRAEPPYKSVAALNCVILGCANIWDLDRAYQTFESIGSTFGLIPDIHSYNGLIYAFGKLKKTHEATRVFEHLVSLGLKSNAKSYSLLVDAHLINRDVKSALAVIDDMRAAGYEPSKEMLKKVRRRCTREMDNESDARVQSLANSLNYQLGSENRRDILFNLNYSMGYA*	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso1g0498	616	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	180	214	IPR002885	-
	Gso1g0498	616	MobiDBLite	consensus disorder prediction	36	84	-	-
	Gso1g0498	616	Pfam	PPR repeat	496	525	IPR002885	-
	Gso1g0498	616	Pfam	PPR repeat	531	559	IPR002885	-
	Gso1g0498	616	Pfam	PPR repeat	183	211	IPR002885	-
	Gso1g0498	616	PANTHER	OS07G0599000 PROTEIN	1	616	IPR044605	-
	Gso1g0498	616	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	528	562	IPR002885	-
	Gso1g0498	616	Gene3D	Tetratricopeptide repeat domain	116	326	IPR011990	GO:0005515
	Gso1g0498	616	Gene3D	Tetratricopeptide repeat domain	339	604	IPR011990	GO:0005515
	Gso1g0498	616	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	493	527	IPR002885	-
	Gso1g0498	616	TIGRFAM	PPR: pentatricopeptide repeat domain	531	563	IPR002885	-
	Gso1g0498	616	TIGRFAM	PPR: pentatricopeptide repeat domain	495	528	IPR002885	-
	Gso1g0498	616	TIGRFAM	PPR: pentatricopeptide repeat domain	183	211	IPR002885	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso1g0498	Gso-Chr1	7712250	7717930	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso1g0498	1	7712250	7717930	Gso2g0973	2	11327513	11333376	GST