Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1921 ATGGACTCTTTGTCTTTGCACTCAAACCTCCATTCCGTTAACAATAAGCGCCGCCAAATCACACACCAAAACTCCTTCGCTCTCACTCCCTCCTGGACTTCCCTAACCGAACAGCGCCTCTACTCCTCCAAGCTCCTCCACTCGCTCCGCCGCAACAGCAACCCTACCGCCGCCCTCGAAGTCCGCGCCTCCGCTGACCGCGTCCTCGCCGCCACTGCCAAAGGCCGAACTCGCTGGAGCCGCGCCATTCTCTCAAATCCGATCTGCCGGTGGAAGCAGAGACACCACAAGAAGGTCAAGAAGTACTCCGCCAACAAATTCATGAAGAAGACGACGCCTGAGATTCGGAGAAGCTTGCCGGCTGTGCAGAAGAAAGCGCGCGTTCTCGGAAAGTTAATTCCTGGTTGCCGGAAGGTGTCGTTCCCGAAGCTTCTAGAAGAAGCCGGTGACTATATTTCGGCGTTGGAGATGCAAGTGCGAGCCATGAAGGCTCTCGCCGACCTCCTCGCCACCGGTGCTCCGCCGCCAGCTCCGATCGGTTTGAGTTGA 549 0.5756 MDSLSLHSNLHSVNNKRRQITHQNSFALTPSWTSLTEQRLYSSKLLHSLRRNSNPTAALEVRASADRVLAATAKGRTRWSRAILSNPICRWKQRHHKKVKKYSANKFMKKTTPEIRRSLPAVQKKARVLGKLIPGCRKVSFPKLLEEAGDYISALEMQVRAMKALADLLATGAPPPAPIGLS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1921 182 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 11 181 IPR044660 GO:0006355
Gso19g1921 182 PANTHER TRANSCRIPTION FACTOR BHLH150 11 181 - -
Gso19g1921 182 CDD bHLH_AtIBH1_like 116 166 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1921 Gso-Chr19 47919282 47920196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1921 32 162 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 50.000 1.00e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1921 - - gmx:100802046 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1921 19 47919282 47920196 Gso19g1921 19 47919282 47920196 ECH
Gso19g1921 19 47919282 47920196 Gso3g1960 3 45135758 45136663 GST
Gso19g1921 19 47919282 47920196 Gso10g1339 10 39727781 39728790 PCT
Gso10g1339 10 39727781 39728790 Gso19g1921 19 47919282 47920196 PCT