Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0162 ATGGTGTTGATCAGAGAAGAAGAGATAGTGGAGGAGATGAGTGAAGCGGAGTGCAATATCGACTACGAGAAGCTGAAGAAACGCATGTGGAAGGACCGAGTCCTTCTGCAGAAGCTGAAGGAGAAGCGGCAGAAACAGGAACCAGACGTGGAAGCGAAACAAGAGGCATCGAAGAGGAAGAAGATGTCACGAGCACAAGACTCGGTTCTCAAGTACATGGTGAAGATCATGGAGGTCTGCAACGCCCAAGGCTTCGTCTACGGCATCATCCCCGAGAAGGGAAAACCCATGTCCGGTTCCTCCGGTAGCCTCCGCAAGTGGTGGAAGGACCAAATCCGCTTTGACCAAAACGCCCCCGTCGCAGTCTCAAAGTACCTCCCACTCCTCTCAAAAGACATTGACCTTGACATTGCTTCCTACATACACCTCCTCCAAGACTTGCAAGACTCAACCCTAGGGTCTCTTCTTTCCGCTCTCATGCAACACTGTGCCCCTCCACAGAGAAGGTTCCCTTTGGAGGGAGGGCTTTCCCCTCCTTGGTGGCCCAACGGGGAGGAAATCTGGTGGGGCGAACAGGGCCTTCTGGCCCAAGAAAACGGCCCACCTCCTTACAGAAAGCCCCATGACTTGAAAAAGGCTTGGAAAGTTTCTGTCCTCGCCGCAGTTATCAAACACATATCTCCAGATTTTGATAAACTCAGAAGGCTGGTGACTCAGTCCAAGACCTTGCAAGATAAGATGACTGCCAGGGACAGTGCCACGTGGTCAAAAGTCATGAACCATGAAGAGGCTTTGCTAGATCTAACCGAGAAGTGCCTCAAAATATCTAATGATGATGACAACCTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGTTTTCTGGTTCTCATGAACCTCAACTTTTGAAGAGGAAGGGCGCGTTTGGCTTTGGTAGTACTGATGCTTTAGTGGATAAGCTGTATGCTTGTCAAAACGCAGGGTGTCCACAGAGTGAGCCTTCTATGGAGTTTGCGGATAAGAACTTGAGGCTGGACCATGAGGCTCTGTGTGCTTTCCGAACAGTGGATAGCGATGTTCTTCCATTTCACCGTTATCTCTCCAATGATGCACCACCAATCACAAGTTTGGATGATTTGATGAACGTGGCTTTTCAGAATGATGTGAACCTTGGTGAGGCTGCTGGTGGGAGTGGCACATTGGAAGATGACCCTTGTTACTGGCTTAACGCCATTGAAAATCTTGAGTTGCAGGCTGCGTTAGAGTTGTTGGTGAGAGATAACATGGACTTTGCTCAAAATGTTCCGGCGCAGATTCCGCAGGGACAGGGACAAGAGGATGCAGCCTCAGTTTGGGGCTTGGGAACCCATCCAACGCAAGGATAG 1431 0.492 MVLIREEEIVEEMSEAECNIDYEKLKKRMWKDRVLLQKLKEKRQKQEPDVEAKQEASKRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPMSGSSGSLRKWWKDQIRFDQNAPVAVSKYLPLLSKDIDLDIASYIHLLQDLQDSTLGSLLSALMQHCAPPQRRFPLEGGLSPPWWPNGEEIWWGEQGLLAQENGPPPYRKPHDLKKAWKVSVLAAVIKHISPDFDKLRRLVTQSKTLQDKMTARDSATWSKVMNHEEALLDLTEKCLKISNDDDNLEEEEEEEEEEEEEEEEEEEEEEEEEGFSGSHEPQLLKRKGAFGFGSTDALVDKLYACQNAGCPQSEPSMEFADKNLRLDHEALCAFRTVDSDVLPFHRYLSNDAPPITSLDDLMNVAFQNDVNLGEAAGGSGTLEDDPCYWLNAIENLELQAALELLVRDNMDFAQNVPAQIPQGQGQEDAASVWGLGTHPTQG* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0162 476 Coils Coil 272 308 - -
Gso18g0162 476 SUPERFAMILY DNA-binding domain of EIN3-like 141 266 IPR023278 GO:0003700|GO:0005634
Gso18g0162 476 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 476 IPR006957 GO:0005634
Gso18g0162 476 Pfam Ethylene insensitive 3 24 263 IPR006957 GO:0005634
Gso18g0162 476 MobiDBLite consensus disorder prediction 455 476 - -
Gso18g0162 476 MobiDBLite consensus disorder prediction 276 314 - -
Gso18g0162 476 MobiDBLite consensus disorder prediction 279 309 - -
Gso18g0162 476 Gene3D - 51 131 IPR023278 GO:0003700|GO:0005634
Gso18g0162 476 Gene3D - 134 272 IPR023278 GO:0003700|GO:0005634
Gso18g0162 476 MobiDBLite consensus disorder prediction 41 62 - -
Gso18g0162 476 PANTHER ETHYLENE INSENSITIVE PROTEIN 1 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0162 Gso-Chr18 1395258 1397028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0162 20 370 EIL Transcription Factor Family AT5G65100 48.441 3.61e-130 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Gso18g0162 EIN3 4.4e-112 No_clan