Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2226 ATGGAGAAGCCAGGAGGAGGAGGAGTGTTATCGGCGAAGGAGGCATTCGAGAAGCTTGAAAAGGTGGGAGAAGGGACATATGGGAAGGTGTACAGAGCAAGAGAGAAGGCCACGGGGAAGATCGTGGCTCTGAAGAAGACTCGTCTCCACGAGGACGAAGAAGGTGTCCCTCCCACCACTCTCCGTGAGGTTTCCATTCTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTCTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAAACTGGACAAACCGTTCCACCCCAAACCATCAAAAGCTTGATGTACCAGCTTTGCAAGGGCGTTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAACCTCACAATCTCTTGATGGACCCAAAAACCATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGAGCATTTACTGTGCCGATTAAGAAATATACACATGAGATACTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCGGTGGACATTTGGTCCGTAGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCACTCTTTCCTGGTGATTCCGAACTGCAACAACTCCTGCATATATTCAGGCTATTGGGTACTCCCAACGAAGACGTGTGGCCAGGCGTGAGTAAACTAATGAACTGGCATGAATACCCTCAATGGAACCCTCAAAGTCTGTCAACGGCTGTTCCAAGTTTGGATGAGCTTGGACTGGATTTGCTATCTCAAATGTTGAAATATGAGCCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACATGCTTACTTTGATGACTTGGACAAGAGGCACCTTTAG 945 0.4783 MEKPGGGGVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQTVPPQTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDPKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEDVWPGVSKLMNWHEYPQWNPQSLSTAVPSLDELGLDLLSQMLKYEPSKRISAKKAMEHAYFDDLDKRHL* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2226 314 Gene3D Phosphorylase Kinase; domain 1 11 102 - -
Gso17g2226 314 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gso17g2226 314 SMART serkin_6 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g2226 314 Pfam Protein kinase domain 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g2226 314 PANTHER CELL DIVISION PROTEIN KINASE 11 312 - -
Gso17g2226 314 ProSiteProfiles Protein kinase domain profile. 16 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g2226 314 SUPERFAMILY Protein kinase-like (PK-like) 14 309 IPR011009 -
Gso17g2226 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gso17g2226 314 Gene3D Transferase(Phosphotransferase) domain 1 104 313 - -
Gso17g2226 314 PANTHER - 11 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2226 Gso-Chr17 41933575 41935090 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Gso17g2226 Pkinase 5.4e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1898 14 51429660 51432001 Gso17g2226 17 41933575 41935090 GST