Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2225 ATGAATCAGGGGAATCTAGGCGAGTTAATCAGAATGCACTTGAGCGAGAACGAAGGGATAGAGGGGAAGACCTTCGTGGTCACCGGTGGACTGGGATTCGTAGGATCTGGTCTCTGCTTGGAGCTCATACGTAGAGGTGCCGTAGAGGTGCGAGCCTTTGACCTCCGCCTCTCTTCTCCTTGGTCGCGTCCTCTCAAGGACAAGGGAGTCCTCTGCATCCAAGGGGATGTTGCCCGCAAAGAAGACGTGGAAAGGGCCCTTCGCGGTGCCGACTGTGTATTCCACCTTGCGGCCTTCGGAATGTCAGGCAAAGAGATGCTCCAATTTGGTCGCGTCGATGAAGTCAACATTAATGGTACTTGCCATGTTATCGACGCTTGCCTCTACCTCGGCATCAAAAGGCTTGTCTACTGTAGCACATGCAATGTTGTCTTTGGCGGTCAACAGATCATCAATGGGAATGAGACATTGCCCTATTTCCCAATTGATCACCATGTCGATCCTTATGGCCGCAGCAAATCTATTGCTGAACAGTTGGTTCTTAAGAACAATGCCCGCACTCTCAAGAGCGATTCCTCCGGGAATCATCGTCTTTACACTTGTGCTGTTCGTCCAGCTGCAATCTATGGACCGGGTGAAGACAGACACCTTCCAAGGATCGTAACCATGGCAAGGTTGGGTCTCCTTTTGTTCAGAATTGGCGACCAAACTGTAAAATCAGATTGGATTTTTGTGGATAACCTTGTCCTTGCTCTTATATTGGCGAGTATGGGACTTTTGGATGACAATCTTAGCAAGGGAAAACGCCCTGTAGCTGCTGGCCAGGCCTACTTTATATCTGATGGCTCACCGGTCAATTCTTTTGAATTCCTGCAGCCTCTACTTAGGAGTTTGGGTTATGAACTGCCAAAGACTTCCCTACCAGTCGAACGTGCTCTTGTTCTCGGGAGGATTTGCTGGGCTGTTTATACAATCCTATATCCATGGCTCAATCGGTGGTGGCTTCCACAGCCATTCATCCTCCCCTCTGAAGTTCACAAGGTGGGAGTGACCCATTATTTCTCTTATCTTAAAGCCAAAGAGGAGATTGGCTATGCTCCCATGGTGACCTCTCGAGAGGGGATGGCTTTGACCATATCTTACTGGCAAGAGAGGAAACGGACAACTCTGGATGGACCGACAATCTATGCGTGGTTGTTTTGTGTCATTGGAATGATCTCACTGTTTTGTGGTGCTTTCTTACCTGATATAGGGATCATGTCCCTTCTCAGAACTACATGTCTATTTGTCTTTCGGTCAATGTGGGTTACAAGGCTGGTGTTTCTTCTGGCTACAGCTGCACATATTGCTGAGGCCATTTATGCTTGGTACCTGGCTAAAAGGGTGGATCCTGCCAATGCAAGAGGATGGTTTTGGCAAACTTTTGCTCTTGGGTTCTTTTCGTTGCGTTTACTATTGAAAAGAGCAAGGAAATAG 1476 0.4817 MNQGNLGELIRMHLSENEGIEGKTFVVTGGLGFVGSGLCLELIRRGAVEVRAFDLRLSSPWSRPLKDKGVLCIQGDVARKEDVERALRGADCVFHLAAFGMSGKEMLQFGRVDEVNINGTCHVIDACLYLGIKRLVYCSTCNVVFGGQQIINGNETLPYFPIDHHVDPYGRSKSIAEQLVLKNNARTLKSDSSGNHRLYTCAVRPAAIYGPGEDRHLPRIVTMARLGLLLFRIGDQTVKSDWIFVDNLVLALILASMGLLDDNLSKGKRPVAAGQAYFISDGSPVNSFEFLQPLLRSLGYELPKTSLPVERALVLGRICWAVYTILYPWLNRWWLPQPFILPSEVHKVGVTHYFSYLKAKEEIGYAPMVTSREGMALTISYWQERKRTTLDGPTIYAWLFCVIGMISLFCGAFLPDIGIMSLLRTTCLFVFRSMWVTRLVFLLATAAHIAEAIYAWYLAKRVDPANARGWFWQTFALGFFSLRLLLKRARK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2225 491 Pfam Transmembrane protein 254 400 486 IPR028110 -
Gso17g2225 491 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 20 374 - -
Gso17g2225 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 389 IPR036291 -
Gso17g2225 491 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 26 308 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gso17g2225 491 Gene3D - 13 388 - -
Gso17g2225 491 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 20 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2225 Gso-Chr17 41921883 41924343 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1897 14 51424792 51427152 Gso17g2225 17 41921883 41924343 GST
Gso17g2225 17 41921883 41924343 Gso4g0169 4 1502441 1505935 PCT
Gso17g2225 17 41921883 41924343 Gso6g0157 6 1473071 1476525 PCT