Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2184 ATGATGTCTGTTACTGTTGCTGCCGACACTACCTCCGCCGCCGTAGGATCCTGTCTTTCACGATCGCGGCGGCGGTGCTTAACGGTGGCTCTCCGATCTAAAGTGTCAGTCACCCCAACCAGAATATTGACGAAACTCAAACACGAGTGTGCCACTCCTCTGCCCCTTCTTCAGCAAGTGGCCAATAACATGTCTTCTGACATGCGAGCTGGGCTTGCTGCAGAGGCTGGGCCTGGGCCCGGGCTTCCCATGATACCCAGCTATGTTGAAAATCTTCCCACTGGGAATGAGAAAGGGTTGTTTTATGCCTTGGATCTCGGAGGAACCAACTTCCGTGTGCTGAGGGTGCAGTTGGGTGGCAAAGATGAGCGTGTCATTGCCACCGAGTTTGATCAAGTTTCCATACCTCATCAACTCATGTTTGCTACATCTCAGGAGCTGTTTGATTTCATTGCTTCGGGGCTAGCAAAATTTGCGTCCAAGGAGGATGGTAGATTTCATATCTCACCGGGAAAAAAGGGAGAGATTGGCTTCACGTTTTCATTTCCTGTGAAGCAGGCATCTATTGATTCTGGCATACTAATCAAGTGGACCAAGGGTTTTGCAGTGTCTGGAACAGCAGGGAGAGATGTGGTGGCTTGTCTGAACGAGGCAATGGAAAGGCAAGGAATAGACATGCGAGTTTCTGCTCTGGTGAATGATACCGTGGCAACGTTAGCTGGAGCAGAATACTGGGATAATGATGTCGTGGTTGCTGTCATTTTGGGTACTGGAACCAATGCTTGCTATGTTGAACAGATCAGTGCCATTCCTAAGTTACAGGGCCATGTCTCTTCTTCTGGGAAAATGATCATTAGCACTGAGTGGGGTGCTTTCTCAAATGGTCTCCCTTTAACCAAGATCGATAGGGAAATGGATGCTGCTAGCATCAATCCGGGTGAGCAGATATTTGAAAAGACAATCTCGGGAATGTATCTAGGCGAAATTGTTAGACGAGTGTTGCTGGAAATGGCTGAAGAGGGTGGTTTGTTTGGAAAATCTGTCCCGCAGAAACTATCTACACCTTTCATACTCGGGACCCCAGATCTATGTGCCATGCAGCAGGACAGTTCTGGCGATTTACATGCAGTTGGGTCCCTCCTCTATGATAAAGCAGGGGTTGAATCCAATTTAAGTGAAAGAAAAACAGTTTTAGAGGTTTGTGAGACAATTGTAAAGCGAGGTGGGAGCTTAGCTGGTGCAGGAATAGTGGGGATTCTACAAAAAATGGAAGAGGATCAGAGAGGTCTCGTCTTTGGGAATGGGAAGAGAAGTGTTGTTGCCATTGATGGGGGCTTATATGAAAATTATCCTCAATACAGGGCTTATTTGCAAGATTCAGTCACAGAGCTGCTAGGAACAGAAAAGTCAAACAATGTGGTGATAGAGCATACTAAAGATGGATCTGGAATAGGAGCTGCTCTATTGGCTGCTTCAAACTCCATGTACAACCAAGACTTATAG 1503 0.4697 MMSVTVAADTTSAAVGSCLSRSRRRCLTVALRSKVSVTPTRILTKLKHECATPLPLLQQVANNMSSDMRAGLAAEAGPGPGLPMIPSYVENLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFDQVSIPHQLMFATSQELFDFIASGLAKFASKEDGRFHISPGKKGEIGFTFSFPVKQASIDSGILIKWTKGFAVSGTAGRDVVACLNEAMERQGIDMRVSALVNDTVATLAGAEYWDNDVVVAVILGTGTNACYVEQISAIPKLQGHVSSSGKMIISTEWGAFSNGLPLTKIDREMDAASINPGEQIFEKTISGMYLGEIVRRVLLEMAEEGGLFGKSVPQKLSTPFILGTPDLCAMQQDSSGDLHAVGSLLYDKAGVESNLSERKTVLEVCETIVKRGGSLAGAGIVGILQKMEEDQRGLVFGNGKRSVVAIDGGLYENYPQYRAYLQDSVTELLGTEKSNNVVIEHTKDGSGIGAALLAASNSMYNQDL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2184 500 PANTHER HEXOKINASE 14 496 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gso17g2184 500 PRINTS Hexokinase family signature 102 118 - -
Gso17g2184 500 PRINTS Hexokinase family signature 176 201 - -
Gso17g2184 500 PRINTS Hexokinase family signature 228 244 - -
Gso17g2184 500 PRINTS Hexokinase family signature 251 265 - -
Gso17g2184 500 PRINTS Hexokinase family signature 315 337 - -
Gso17g2184 500 PRINTS Hexokinase family signature 397 419 - -
Gso17g2184 500 PRINTS Hexokinase family signature 476 492 - -
Gso17g2184 500 Pfam Hexokinase 251 491 IPR022673 GO:0005524|GO:0005975|GO:0016773
Gso17g2184 500 ProSitePatterns Hexokinase domain signature. 176 201 IPR019807 GO:0004396|GO:0005524|GO:0006096
Gso17g2184 500 Gene3D - 87 490 - -
Gso17g2184 500 SUPERFAMILY Actin-like ATPase domain 248 493 IPR043129 -
Gso17g2184 500 Gene3D - 63 479 - -
Gso17g2184 500 CDD NBD_sugar-kinase_HSP70_actin 103 265 - -
Gso17g2184 500 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 14 496 - -
Gso17g2184 500 SUPERFAMILY Actin-like ATPase domain 34 246 IPR043129 -
Gso17g2184 500 ProSiteProfiles Hexokinase domain profile. 37 491 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gso17g2184 500 Pfam Hexokinase 44 244 IPR022672 GO:0005524|GO:0005975|GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2184 Gso-Chr17 41545039 41548846 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1846 14 50906580 50910751 Gso17g2184 17 41545039 41548846 GST