Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2176 ATGGACCGACGCTGGCCATGGAAGAAAAAATCGTCGGACAAGGCTGTGCTTGAGAAAGCAGCTGCGGAATTGGACTCTGCTGCGGGTGCTGCTGCAACTCAGAAGCCGAGCTACATCCAAATCTCGGTAGAGTCATATTCCCATCTGACTGGTTTGGAGGATCAAGTGAAGACATATGAAGAAAAAGTTCAGACACTGGAGGATGAGATCAAGGAATTAAATGAAAAACTGTCAGCAGCTAATTCAGAGATAAATACCAAGGAAAGCTTGGTAAAACAGCATGCTAAGGTCGCAGAAGAGGCTGTCTCAGGCTGGGAGAAGGCTGAAGCAGAAGCTTTGGCGTTGAAGAACCATCTGGAAACTGTCACTCTTGCAAAACTTACTGCTGAGGATCAGGCATCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACATGAACAGAAAATACAGGAAGTTACTCTCACAAAAACTAAGCAATTGGACAAGATTAAGGGTGAGTTTGAGGCTAAGATAGCGAACTTTGAACAGGAACTCCTCAGGTCTGCTGCAGACAATGCGGCTCTGTCAAGGTCCTTGCAAGAGCGCTCTAACATGATAATCAATTTAAGTGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCTTCTCAAGGGCAACATTGAATCTTGTGAAAGAGAAATCAATTCACTCAAATATGAGCTTCATGTTATTTCCAAAGAGCTTGAGATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCACATGGAGGGTGTTAAAAAAATTGCTAAACTAGAGGCAGAATGCCAAAGATTACGTGGTCTAGTGCGGAAAAAGTTACCTGGTCCTGCCGCACTTGCGCAAATGAAGCTAGAAGTTGAAAGTCTTGGCCGAGAATATGGAGAAACTCGATTGAGGAAGTCTCCTGTCAAACCTGCTAGTTCTCACATGTCCACATTGGCTGGGTTCTCCCTTGATAATGCTCAGAAATTCCACAAAGATAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAGACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAACAGTGAGTTGCAGGCTTCAAGGAGTAGTTTTGCTAAAACTTTGAGCAAACTTCAAATTTTGGAAGCACAGGTTCAGACAAATAATCAGCAGAAGGGATCTCCTCAATCCATCATCCATATAAATCATGAAAGCATTTACAGTCAAAATGCAAGCAATGCACCAAGCTTTGTCTCCTTGTCTGAAGATGGAAATGATGATGTGGGAAGTTGTGCTGAGTCTTGGTCTACAGCATTTCTCTCTGAGTTATCCCAATTCCCTAAAGAAAAGAATACTGAGGAATTGAGCAAATCTGATGCCACTAAGAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAATTGGCTTGGTTATCAAATGAATCCAGTGGAGTTTCAGTTACTTCAAACAATATAACAAATGAAATTGTGGTCAATGATCTATCAGAGGTCAGTGCTGGGAAAGATGTTCCCTCTAACACCCAAGAGAACAGTGAGCCAAATCCATTGCCAAGTGAGGTTTCTTCTGCTGAGGAATTGTCAGCACCTGATCCCCAATCTGATGTTCCAGCTGGCTTGTCGCTAGCAGAGCTTCAATCAAGAATATCATCAGTTTTTGAGTCCTTGGCTAAGGATGCTGACATGGAGAAGATCCTGAAGGATATTAAACACGCTCTTGAAGAGGCATGTGGCACTTCCATCCAGGACTCTGTATCTGCCATTCCCCATGATGTCAAGCCTTCTGATACTACGTGTGATGAGCTGGGTAATGCTGAAGATGCTGGCTCAAATGCAGAAAAAGAAATTTCGTCCCAGAAACCTACAGAATTTGTGCAGATGACTTCGGATTTAGAAGCCGCAACTTCTCAAATTCATGACTTTGTCTTGTTCCTAGCCAAAGAAGCAATGACAGCTCATGATATATCTTCTGATGGAGATGGAATAAGCCAAAAGATGAAGGAGTTCTCTGTTACTTTTAATAAAGTTACATGCAATGAAGCAAGTTTGCTGCAGTTCGTTCTTGACCTGTCTAATGTTCTAGCCAAAGCAAGTGAATTTAGATTTAATATCCTTGGTTATAAGGGTAGAGAAGCTGAAACTAATAGTCCTGATTGCATAGATAAGATTGCTCTGCCAGAAAATAAGTTAGTTCAAGACAATTCATCAGGAGAGAGATTTCAAAATGGTCGTTCACATATTCTTAATCCCTGTTCTGATCCTGAGATTCCTGATGATGGAAATTTGGCCCCAGGCTATGAATCAAATGCCACGTCACAGAAGTTCTCAATGGAGAACTTTGAAGAATTGAAATTAGAGAAAGAGAAGGCAGTTGTTGATCTGTCAAAGTGTGTTGAAAATCTTGAAATGACAAAGTCTCGATTACTAGAGACAGAGCAACATCTAGCTGAAGTTAAATCACAATTGACTTCTGCTCAAAGATCAAACAGCCTGGCTGAGACGCAACTAAAATGTATGACAGAATCATACAGGTCAATTGAAGCACGCGCAAAGGAGTTTGAAACTGAGCTTAATCATCTGCGAATGAAGACAGAAACTCTGGAGAATGAACTTGAAGATGAAAAGAGGGCTCATGAAGAAGCTTTGGCTAAGTACAAGGAGCTAGAAGAACAACTACAAAGGAATGAGAGCTCAGCTGCTGATAATGACATTAAGACTAAGCAGGAGAGAGACTTGGAAGCTGCTGCTGAAAAGTTAGCTGAGTGTCAGGAAACCATATTTCTTCTTGGCAAGCAGTTAAAATCGATGCATCCTCAAACAGAGCCAACGGGGCCTCCTTATTCAAAGGCTGAAGGCTTCGCAGAGCGTGAACCTAATAGCCCAAATTTTCAGGATCAAGCAGAGATGGACAGTGCTAGTTCTGCATTTGTGCAAAGACTGGGTGGAGAGTCCCCCTTACATTTTTCTAACAGTTTATACAGTCCATCAGATAATGAGTCAAACTTTCCAGCCATATCTTCTGTACAGAATCCAAACCACAGGCCTACAAAGTCAACCTCTTCGTCTGCTTCTTCCACTCCTACACCGGAGAAACACAACCGAGGTTTCAGTAGATTCTTTTCATCAAAAGGAAAAAACGGTCATTGA 3213 0.4192 MDRRWPWKKKSSDKAVLEKAAAELDSAAGAAATQKPSYIQISVESYSHLTGLEDQVKTYEEKVQTLEDEIKELNEKLSAANSEINTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLETVTLAKLTAEDQASQLDGALKECMRQIRNLKEEHEQKIQEVTLTKTKQLDKIKGEFEAKIANFEQELLRSAADNAALSRSLQERSNMIINLSEEKAHAEAEIELLKGNIESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGREYGETRLRKSPVKPASSHMSTLAGFSLDNAQKFHKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSSFAKTLSKLQILEAQVQTNNQQKGSPQSIIHINHESIYSQNASNAPSFVSLSEDGNDDVGSCAESWSTAFLSELSQFPKEKNTEELSKSDATKKLELMDDFLEVEKLAWLSNESSGVSVTSNNITNEIVVNDLSEVSAGKDVPSNTQENSEPNPLPSEVSSAEELSAPDPQSDVPAGLSLAELQSRISSVFESLAKDADMEKILKDIKHALEEACGTSIQDSVSAIPHDVKPSDTTCDELGNAEDAGSNAEKEISSQKPTEFVQMTSDLEAATSQIHDFVLFLAKEAMTAHDISSDGDGISQKMKEFSVTFNKVTCNEASLLQFVLDLSNVLAKASEFRFNILGYKGREAETNSPDCIDKIALPENKLVQDNSSGERFQNGRSHILNPCSDPEIPDDGNLAPGYESNATSQKFSMENFEELKLEKEKAVVDLSKCVENLEMTKSRLLETEQHLAEVKSQLTSAQRSNSLAETQLKCMTESYRSIEARAKEFETELNHLRMKTETLENELEDEKRAHEEALAKYKELEEQLQRNESSAADNDIKTKQERDLEAAAEKLAECQETIFLLGKQLKSMHPQTEPTGPPYSKAEGFAEREPNSPNFQDQAEMDSASSAFVQRLGGESPLHFSNSLYSPSDNESNFPAISSVQNPNHRPTKSTSSSASSTPTPEKHNRGFSRFFSSKGKNGH* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2176 1070 SUPERFAMILY Tropomyosin 801 961 - -
Gso17g2176 1070 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1070 - -
Gso17g2176 1070 Pfam Filament-like plant protein, long coiled-coil 87 964 IPR008587 -
Gso17g2176 1070 Coils Coil 858 920 - -
Gso17g2176 1070 MobiDBLite consensus disorder prediction 1006 1054 - -
Gso17g2176 1070 Coils Coil 133 167 - -
Gso17g2176 1070 Coils Coil 927 947 - -
Gso17g2176 1070 Coils Coil 823 850 - -
Gso17g2176 1070 MobiDBLite consensus disorder prediction 519 551 - -
Gso17g2176 1070 Coils Coil 201 284 - -
Gso17g2176 1070 Coils Coil 49 90 - -
Gso17g2176 1070 Coils Coil 344 371 - -
Gso17g2176 1070 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1070 - -
Gso17g2176 1070 MobiDBLite consensus disorder prediction 519 559 - -
Gso17g2176 1070 MobiDBLite consensus disorder prediction 957 1070 - -
Gso17g2176 1070 MobiDBLite consensus disorder prediction 620 642 - -
Gso17g2176 1070 MobiDBLite consensus disorder prediction 981 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2176 Gso-Chr17 41460278 41466617 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1838 14 50817488 50823799 Gso17g2176 17 41460278 41466617 GST
Gso17g2176 17 41460278 41466617 Gso4g0224 4 2034784 2040565 PCT
Gso17g2176 17 41460278 41466617 Gso6g0203 6 1934506 1940413 PCT
Gso4g0224 4 2034784 2040565 Gso17g2176 17 41460278 41466617 PCT
Gso6g0203 6 1934506 1940413 Gso17g2176 17 41460278 41466617 PCT