Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2173 ATGGGTTCAGTTTCTCTGAAAATAGGAGATGGAACAGCCAGATTCCAAAGAGCAACACTGTGTTCTTCAGCTGTTAACATTCTCATGATATTCTCTGTCATCACCACCAACCTCTTTGCTCTCTATGCCTTCACCGCTTCCCCAAATCAACCCCAACACTCTCTCCTTCACCACAACAATGCCCACAAAAACATCTCTCTCATCTCTGAACAAGTCTCACTCATCCTCAGAGAGATCGATTTATCCCAAAAGAAACTTGCCCAGATGGAGAAAGAGCTTCTTGGATACGAAAGCATTGATCTTTCGAGACCCAACATTGCATCCGAGCTCAAACTCTTCCTCCAGAGGCACCAGCTCCCTCTGGGGAAAGACTCAAGAACTGGGATCACTGAGATGGTCCCATCTGTTGGCCACACGTGTGAGAAAAATTCAGACTTTCTGTCTCAGTTCATGAATTACAAGGTTTTTGGAGCTTGCCCTGATGATTGGAGTGTGGCACAGAAGCTGATCTTAAAAGGGTGTGAGCCTCTGCCTAGGAGGAGGTGTTTTGCAAAGACTGTTTCCAAGGCAGGTTGGTACCCTTTTCCAGATTCTCTTTGGAAGCCTGTTGGTAACAAGACTGTTAACTGGAGTGGTCTTAATTGTAAGAATTTTGAGTGTTTGAATGGTAAGAAGTTGAGTAGGGAGTGCATTGGTTGCTTTGATTTGGTTCATGGCAATGAGAATGTTAGGTTTGTTAAGGCTAAGAGTAAGAATGATTTTCTGGTCGACGATGTTATGGCCTTGGGAGGTGGAGGGGTTAGAGTAGGGCTTGACATTGGTGGAGGGTCGGGATCCTTTGCCGCCAGAATGGCGGATAGGAATGTTACCGTGGTTACTAGCACTCTCAATGTCGATGCCCCATTCAGTGAGTTCATTGCTGCAAGAGGGCTTTTTCCTCTTTACTTGAGCTTGGACCATAGGTTCCCTTTCTATGACAATGTGTTTGACTTGGTTCACGCTTCCAGTGGCTTGGATGTTGGAGGGAAGAGTGAGAAGTTGGAGTTTTTGATGTTTGATATTGACAGAGTTTTGAGGGCTGGTGGTTTGTTCTGGCTGGACAACTTCTTCTGTGCCAATGAAGAGAAGAAGCAAACTTTGACTCGGTTGATTGAAAGGTTTGGGTATAAAAAGTTGAAATGGGTTGTGGGAGAGAAGGTTGATAGTGTTGGCTCAGGCAAACCTGAGGTTGTGTTATCTGCTGTCCTTCAGAAACCTGTTAGAGCTTAG 1269 0.4523 MGSVSLKIGDGTARFQRATLCSSAVNILMIFSVITTNLFALYAFTASPNQPQHSLLHHNNAHKNISLISEQVSLILREIDLSQKKLAQMEKELLGYESIDLSRPNIASELKLFLQRHQLPLGKDSRTGITEMVPSVGHTCEKNSDFLSQFMNYKVFGACPDDWSVAQKLILKGCEPLPRRRCFAKTVSKAGWYPFPDSLWKPVGNKTVNWSGLNCKNFECLNGKKLSRECIGCFDLVHGNENVRFVKAKSKNDFLVDDVMALGGGGVRVGLDIGGGSGSFAARMADRNVTVVTSTLNVDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVHASSGLDVGGKSEKLEFLMFDIDRVLRAGGLFWLDNFFCANEEKKQTLTRLIERFGYKKLKWVVGEKVDSVGSGKPEVVLSAVLQKPVRA* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2173 422 Coils Coil 72 92 - -
Gso17g2173 422 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 421 - -
Gso17g2173 422 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 263 390 IPR004159 GO:0008168
Gso17g2173 422 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 251 392 IPR029063 -
Gso17g2173 422 Gene3D Vaccinia Virus protein VP39 252 403 IPR029063 -
Gso17g2173 422 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2173 Gso-Chr17 41382790 41384644 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1835 14 50752124 50753847 Gso17g2173 17 41382790 41384644 GST
Gso17g2173 17 41382790 41384644 Gso4g0226 4 2064923 2066684 PCT
Gso4g0226 4 2064923 2066684 Gso17g2173 17 41382790 41384644 PCT