Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2156 ATGGCTGATTTAGGCTCAGCCCCTTCCAAGAGAATGTGGTGTTCCGTTCCCGAAAGAATGCAGCTGCACTTGGCCATGCTTGCCTTGCAGTTTGGCTATGCTGGATTCCATGTCATCTCAAGAGCTGCACTTAACATGGGCGTTAGCAAGCTTGTTTTCCCTGTCTATCGGAACATCATTGCTTTGCTTTTGCTCCTTCCCTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCAGCCATGACTTTAAACTTCGTCGGCCAGTTCTTTCTTCTGGCACTCGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGGTTGGACAACACATCCCCTACCTTCGCATCAGCAATACAGAACTCTGTGCCAGCCATTACATTCCTCATGGCAGTCATATTAAGAATAGAGCAAGTAAGATTGAACCGAAAAGATGGGTTGGCTAAGGTGGCGGGAACAGTGCTATGCGTGGCTGGGGCGACCGTGATCACACTATACAAAGGTCCAACAATATACAGCCCAACAACTCGTGTGAACAACAGCATGATCATGAACAGAAGCAACACAACAGTTATAACACCAATGTTTGATTTTGGGTCACTGTCACTGGGAGACGCAAAGGGGAAGAACTGGACCCTAGGGTGCTTATACCTGATCGGACACTGCTTGTCGTGGTCTGGTTGGCTTGTGTTGCAAGCACCGGTTCTCAAGAAGTACCCTGCTCGCCTCTCTGTCACTTCCTACACCTGCTTCTTTGGAATCTTGCAGTTTCTCGTCATTGCTTTGCTCCTTGAAAGAGACGCTCAGGCTTGGCTTTTCCACTCTGCTGGAGAAGTTTTCACTATTTTATACGCGGGAGTGGTGGCATCCGGAATTGCCTTCGCTGTACAAATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCCGTCTATCAACCTGTTCAGACTTTTGTTGTGGCCATCATGGCTTCCATTGCTTTAGGAGAAGAGTTCTACTTGGGTGGGATCATTGGGGCAGTGTTGATTGTAGCGGGACTGTACTTTGTCTTATGGGGTAAAAGTGAAGAGAGGAAGTTTGCAATGGAACAGCTTGCGATGGCATCCACTGAGCATAATAGCATCGCAAGCCACGTCAAAGCATCACTTGCTCAGCCACTCCTTTCTTCATCAACAGAGAATGTTTGA 1185 0.4793 MADLGSAPSKRMWCSVPERMQLHLAMLALQFGYAGFHVISRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMTLNFVGQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGLAKVAGTVLCVAGATVITLYKGPTIYSPTTRVNNSMIMNRSNTTVITPMFDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGILQFLVIALLLERDAQAWLFHSAGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAMEQLAMASTEHNSIASHVKASLAQPLLSSSTENV* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2156 394 PANTHER WAT1-RELATED PROTEIN 14 374 IPR030184 GO:0016021|GO:0022857
Gso17g2156 394 Pfam EamA-like transporter family 212 350 IPR000620 GO:0016020|GO:0016021
Gso17g2156 394 Pfam EamA-like transporter family 25 163 IPR000620 GO:0016020|GO:0016021
Gso17g2156 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Gso17g2156 394 PANTHER WAT1-RELATED PROTEIN 14 374 - -
Gso17g2156 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2156 Gso-Chr17 41216294 41220563 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1823 14 50579681 50584436 Gso17g2156 17 41216294 41220563 GST
Gso17g2156 17 41216294 41220563 Gso4g0246 4 2274966 2278340 PCT
Gso17g2156 17 41216294 41220563 Gso6g0225 6 2183753 2187037 PCT
Gso4g0246 4 2274966 2278340 Gso17g2156 17 41216294 41220563 PCT
Gso6g0225 6 2183753 2187037 Gso17g2156 17 41216294 41220563 PCT