Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2154 ATGGGGTTTCTCGAAAGAATCAGTTACTCACACTCCGTTGGTTCCTCTTGTACCGAAATTCGGATAATGGTGTCTCTAATTTCAACATCTCCACCTTCTTCATCTTTCAACATTCATCCCTTCTTCTCTCCAAGGGGCGTCCAATTCAGACACAACTGCGTAAATTACAAACGGAAAACGGTACGGTGCGCCGTCACCAGCGCCGACGCATCTCCTCCGCCGTCAACGTCGTTGGCCAAGGAACCTCACAAATACTTCGACCACGTCATCATCACCGTTCGCGCCGGTGACGGCGGCCACGGCGCGGTGCTGAATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGAAAAACGAAGTTGAAGAAAGGGAAAGGCTCGTTGAAGAGGGACTTCGACGGATCCCTCATTCTCCCCATGGGTGGCCACGGAGGTGACGTCGTGCTCTACGCCGACGAGTCCAAAGACACGCTGCTGGAGTTTCACAACAAAGGCCGCTACCACGCCAAACGCGGTGGCAACGTTGATGCCATGGGCGTTTTGACTTCGATGCTTCGCGATGGACTTGCTGCACCGACGCTGCGTATTGCTGTTCCTGTAGGTACAGTTGTGAAAAGCAAACGAGGGAAGATGTTGGCTGATCTAGCACAACCTTGGGATGAAGTTCTTGTTGCGAGGGGAGGACAAGGAGGGATTAGCTTGTTAGAAATGCCACAGCATAAAAGGAAAAAGATGATGGCTCTGACAACTAATGTGATGAGAGATGACTCGGACAAGGTTTTAATTCACGGTCAACCTGGGGAGGAAGTTAAGCTGGAGTTGATCCTACGAGTTGTTGCTGACGTTGGTCTGATTGGACTTCCAAATGCTGGGAAATCAACACTTCTGGCAGCCATTACACTTGCAAAACCCGATATTGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTTGGTGGTGATCCCAGCTTGGGGGCAGGAATGTATTCATCTGAAGCCACATTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGTAATTTTTTGAGGCACCTCAGGAGGACCCGGCTATTGGTCCATGTTGTTGATGCTGCCACTGAGAATCCTATAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTTGATCGACCATACGTTGTAATTTTGAATAAGATTGACCTACCAGAGGCAAAGGACAAACTTCCATCATTGACTCAAGAAATTATGAGAATTGGCAACGATGGTGCTGCTTCCGATCCAAAACCTAGCCCTGAAGTTCTAGATCCATTGTCTGATGAAACTGACAGGAAGGAAAAAAGACTTGAGGACTATCCACGACCTCTCTCTGTTGTTGGAGTTAGCGTTCTAAAGGGTATCAGGATTAACGAGATGTTAAAGGAGATAAGGTCGGCTTTAAGGAAGTGCTCAGATTCCAAAGAAGCATTGGCTTTCAGCGTGCCACCTTGA 1518 0.4842 MGFLERISYSHSVGSSCTEIRIMVSLISTSPPSSSFNIHPFFSPRGVQFRHNCVNYKRKTVRCAVTSADASPPPSTSLAKEPHKYFDHVIITVRAGDGGHGAVLNQQQQQQQQQQQGKTKLKKGKGSLKRDFDGSLILPMGGHGGDVVLYADESKDTLLEFHNKGRYHAKRGGNVDAMGVLTSMLRDGLAAPTLRIAVPVGTVVKSKRGKMLADLAQPWDEVLVARGGQGGISLLEMPQHKRKKMMALTTNVMRDDSDKVLIHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMYNPEYLDRPYVVILNKIDLPEAKDKLPSLTQEIMRIGNDGAASDPKPSPEVLDPLSDETDRKEKRLEDYPRPLSVVGVSVLKGIRINEMLKEIRSALRKCSDSKEALAFSVPP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2154 505 MobiDBLite consensus disorder prediction 103 128 - -
Gso17g2154 505 Pfam GTP1/OBG 87 277 IPR006169 -
Gso17g2154 505 MobiDBLite consensus disorder prediction 103 121 - -
Gso17g2154 505 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 58 499 IPR045086 GO:0003924|GO:0005525
Gso17g2154 505 PRINTS GTP1/OBG GTP-binding protein family signature 282 302 IPR006073 GO:0005525
Gso17g2154 505 PRINTS GTP1/OBG GTP-binding protein family signature 303 321 IPR006073 GO:0005525
Gso17g2154 505 PRINTS GTP1/OBG GTP-binding protein family signature 338 353 IPR006073 GO:0005525
Gso17g2154 505 PRINTS GTP1/OBG GTP-binding protein family signature 355 373 IPR006073 GO:0005525
Gso17g2154 505 SUPERFAMILY Obg GTP-binding protein N-terminal domain 85 245 IPR036726 -
Gso17g2154 505 MobiDBLite consensus disorder prediction 443 458 - -
Gso17g2154 505 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gso17g2154 505 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 280 490 IPR031167 GO:0005525
Gso17g2154 505 ProSitePatterns GTP1/OBG family signature. 340 353 IPR006074 GO:0005525
Gso17g2154 505 MobiDBLite consensus disorder prediction 429 458 - -
Gso17g2154 505 Gene3D - 279 498 IPR027417 -
Gso17g2154 505 CDD Obg 280 418 IPR031167 GO:0005525
Gso17g2154 505 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 58 499 - -
Gso17g2154 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 281 490 IPR027417 -
Gso17g2154 505 ProSiteProfiles Obg domain profile. 83 279 IPR006169 -
Gso17g2154 505 Pfam 50S ribosome-binding GTPase 281 408 IPR006073 GO:0005525
Gso17g2154 505 Gene3D GTP1/OBG domain 84 278 IPR036726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2154 Gso-Chr17 41194222 41199080 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0601 14 5880707 5885178 Gso17g2154 17 41194222 41199080 GST