Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2150 ATGGAAACCAACTCAGTTTCCAAGCTTCTGTTACTTGTCTTCACTGTTCTGTTTGTTGGTTCTGAGTTGATCCATTGCAGTGTCACCTATGATAGGAAGGCCATTATCATCAATGGCCAAAGGAGAATCCTCATCTCTGGCTCCATTCACTACCCCAGAAGCACCCCTGAAATGTGGGAGGATCTAATTGGGAAGGCGAAAGACGGAGGCCTTGATGTCATTGACACTTATGTTTTCTGGAATGTTCATGAGCCATCTCCTGGCAATTACAATTTTGAAGGGAGGTACGATCTGGTACGGTTCATCAAGACAGTGCAAAGGGTGGGGCTCTATGTCCATCTTCGCATTGGACCTTATGTGTGTGCTGAGTGGAACTTTGGAGGATTTCCAGTTTGGTTGAAGTATGTTCCTGGCATCAGCTTCAGAACAGATAATGGCCCTTTTAAGGCCGCAATGCAAGGTTTCACTCAGAAAATAGTCGAGATGATGAAGAATGAAAAGCTATTTCAGTCTCAGGGTGGTCCAATCATTCTTTCTCAGATTGAGAATGAGTATGGACCAGAAAGCAGGCAATTGGGAGCTGATGGTCATGCATACACAAATTGGGCGGCAAAGATGGCTGTTGGATTGGGCACAGGTGTCCCCTGGGTGATGTGCAAGCAAGATGATGCCCCAGATCCAGTGATAAATACATGTAATGGATTTTATTGTGATTATTTCTCTCCAAATAAACCATACAAGCCTAACCTTTGGACTGAGTCTTGGAGTGGCTGGTTTACAGAATTTGGTGGTCCAATTTACCAGCGACCCGTTCAGGATCTAGCATTTGCAGTTGCTCGTTTCGTTCAAAAGGGTGGCTCACTTTTCAATTACTACATGTACCATGGAGGAACAAATTTTGGACGATCAGCTGGAGGGCCATTCATTACTACAAGCTATGACTATGACGCTCCAATTGATGAATATGGTTTGATCAGGGAACCTAAATATGGTCATTTGAAGGACCTTCATAAAGCTATTAAGCAATGTGAACATGCTTTGGTTTCTTCAGATCCCACTGTGACATCATTAGGAACGTATGAGCAGGCTCATGTGTTCTCTTCGAAAAATGGAGCATGTGCAGCTTTTCTAGCAAACTACCATTCGAATTCGGCAGCAAGAGTGAAGTTCAATAACAGGAACTATGACTTGCCTCCTTGGTCCATAAGTATCCTCCCTGATTGTAGAACAGATGTATTTAACACTGCAAGAGTGAGGTTTCAAACTTCACAGATACAAATGTTACCTAGCAATTCTAGGTTGTTATCATGGGAGACCTATGATGAAGATGTATCTTCGCTAGCCGAAAGTTCCAAGATTACAGCTTCTGGACTATTAGAACAGATCAGCACTACCAGAGACACTAGTGACTATCTATGGTATATAACCAGTGTTGACATAAGTTCATCAGAATCCTTTCTTAGAGGAAGGAACAAGCCCAGCATTACTGTGCATTCTGCCGGCCATGCTGTCCATGTATTTATTAATGGTCAATTTTCAGGCTCCGCTTTTGGGACAAGTAAAGACAGAAGTTGCACATTTAATGGCCCTGCCAACCTACGTGCTGGAACTAATAAAATAGCACTTCTTAGTGTAGCTGTTGGATTACCAAATGTTGGATTCCATTTTGAAACATGGAAGGCTGGGATCACTGGAGTTTTGCTTAATGGACTTGATCATGGACAAAAAGATTTGACTTGGCAGAAGTGGTCATACCAGATTGGTCTAAGAGGAGAGGCTATGAATTTGGTGGCTCCCAATGGGGTCTCATCTGTTGACTGGGAGAAAGACTCACTAGCTGTCCGAAGCCAGTCACAGTTGAAATGGCACAAGGCATATTTCAATGCACCTGAGGGAGTTGAACCATTGGCCTTGGACCTGAGCAGCATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGGAGATACTGGATGGTTTATGCAAAGGGTTCTTGTAGTTCTTGCAACTATGCTGGTACATACCGGCCTGCCAAGTGCCAACTTGGTTGTGGACAACCTACTCAACGATGGTATCATGTGCCAAGATCATGGTTAAGGCCAACAAAGAACTTGATAGTAGTATTTGAGGAATTGGGTGGGAATCCTTGGAAAATAGCTCTAGTAAAAAGGACAACACATACTCCAGCAAACTAG 2199 0.4347 METNSVSKLLLLVFTVLFVGSELIHCSVTYDRKAIIINGQRRILISGSIHYPRSTPEMWEDLIGKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQRVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVEMMKNEKLFQSQGGPIILSQIENEYGPESRQLGADGHAYTNWAAKMAVGLGTGVPWVMCKQDDAPDPVINTCNGFYCDYFSPNKPYKPNLWTESWSGWFTEFGGPIYQRPVQDLAFAVARFVQKGGSLFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLKDLHKAIKQCEHALVSSDPTVTSLGTYEQAHVFSSKNGACAAFLANYHSNSAARVKFNNRNYDLPPWSISILPDCRTDVFNTARVRFQTSQIQMLPSNSRLLSWETYDEDVSSLAESSKITASGLLEQISTTRDTSDYLWYITSVDISSSESFLRGRNKPSITVHSAGHAVHVFINGQFSGSAFGTSKDRSCTFNGPANLRAGTNKIALLSVAVGLPNVGFHFETWKAGITGVLLNGLDHGQKDLTWQKWSYQIGLRGEAMNLVAPNGVSSVDWEKDSLAVRSQSQLKWHKAYFNAPEGVEPLALDLSSMGKGQVWINGQSIGRYWMVYAKGSCSSCNYAGTYRPAKCQLGCGQPTQRWYHVPRSWLRPTKNLIVVFEELGGNPWKIALVKRTTHTPAN* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2150 732 PANTHER BETA-GALACTOSIDASE 3 731 - -
Gso17g2150 732 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Gso17g2150 732 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Gso17g2150 732 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Gso17g2150 732 SUPERFAMILY Galactose-binding domain-like 581 722 IPR008979 -
Gso17g2150 732 Gene3D - 597 730 - -
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Gso17g2150 732 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Gso17g2150 732 Gene3D Glycosidases 24 344 - -
Gso17g2150 732 SUPERFAMILY Galactose-binding domain-like 402 564 IPR008979 -
Gso17g2150 732 PANTHER BETA-GALACTOSIDASE RELATED 3 731 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2150 Gso-Chr17 41164717 41171078 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0606 14 5914937 5921395 Gso17g2150 17 41164717 41171078 GST
Gso17g2150 17 41164717 41171078 Gso4g0252 4 2312327 2317730 PCT
Gso4g0252 4 2312327 2317730 Gso17g2150 17 41164717 41171078 PCT