Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2148 ATGAGTGGAACTGGAACATTCTTCTACGGTTCGGTAATTCAGCCGTTGATTCGCTACCATTATCTATCACCACCAATCCCTATTCGTCCCTTATGCTGCATATCCCCTCTCATCACCTCCATTCACTCCAACGACGCCGTTTCTCCGCAAAACGGAACGCTTCGCTTCCAGACAGAGCATCAGCAGCACAGCGAAGAACCGCTTCCCGTTCCGTCACTCTCTGCCGCCGAAGAAAACAAAGCAACAACGAAGCTTCGAAAGAAGAAAGAAGACGACGTCGTTTCCGATAACCGCTTCAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCGTACCTCGTAGGCGTTGAGCGCAAGAACGATGTTCAGGATTTCGGCATCGAAGAGTCTCTGAGCGAATTGTCGCAGTTAGCTGACACTGCTGGATTATTGGTTGTTGGCTCTACTTACCAGAAGCTTACTTCTCCAAATCCTAGGACGTACATTGGCTCTGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGGCGTTGAAACTGTTATCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAGAAGATTTTTGGTGGAGATGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAACGAGCAGCAACACATGAAGCGTCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTGAAGGGAATGGGTGAAAAACAAATAGAAGTGGACAAACGTATTCTGCGCAACCAAATTGGTATTCTTAAAAAAGAGCTAGAATCTGTTAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGGCAGTTGTATCCTTGGTGGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCAACTAACAGGAGCAGATGTTCTTGCCGAGGATAAATTATTTGCAACTTTAGATCCTACTACGAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCTACACTGGAGGAGATATCGGAGTCATCGCTCTTGGTGCATGTGGTTGATATAAGTCACCCGCTGGCTGAGCAACAGATAAATGCTGTGGACAAAGTCCTGTCAGAACTAGATGTATCGTCAATTCCAAAATTGATTGTCTGGAACAAGGTTGACAAAGTTAGTGATCCCCAGAAACTCAGGCTAGAAGCTGAAAAAAGAGATGATGTTGTATGCATATCTGCTTTAAGTGGTAATGGCTTGCAAGAATTTTGTAATGCAGTTCAAGACAAGCTAAAGGACTCCATGGTTTGGGTGGAAGCTCTGGTCCCATTTGAAAATGGGGACCTTCTCAGCACCATACACCAGGTTGGAATGGTTGAGAAAACTGAATATACAGAGCAAGGGACATATATCAAGGCACATGTGCCCCTGCGTTTTGCAAGAATGCTTACACCCATGAGGCAACTGTGCGTATCGCAACCTTAA 1590 0.4459 MSGTGTFFYGSVIQPLIRYHYLSPPIPIRPLCCISPLITSIHSNDAVSPQNGTLRFQTEHQQHSEEPLPVPSLSAAEENKATTKLRKKKEDDVVSDNRFKLRNGREVFEEKAYLVGVERKNDVQDFGIEESLSELSQLADTAGLLVVGSTYQKLTSPNPRTYIGSGKVSEIKSAIHALGVETVIFDDELSAGQLRNLEKIFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELESVRKHRKQYRNRRFSVPVAVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSSIPKLIVWNKVDKVSDPQKLRLEAEKRDDVVCISALSGNGLQEFCNAVQDKLKDSMVWVEALVPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARMLTPMRQLCVSQP* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2148 529 TIGRFAM GTP_HflX: GTP-binding protein HflX 111 465 IPR016496 GO:0005525
Gso17g2148 529 Hamap GTPase HflX [hflX]. 132 495 IPR016496 GO:0005525
Gso17g2148 529 Gene3D - 121 221 IPR042108 -
Gso17g2148 529 MobiDBLite consensus disorder prediction 57 89 - -
Gso17g2148 529 PANTHER GTP-BINDING PROTEIN HFLX 83 514 IPR016496 GO:0005525
Gso17g2148 529 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 304 470 IPR030394 GO:0005525
Gso17g2148 529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 476 IPR027417 -
Gso17g2148 529 CDD HflX 263 466 IPR030394 GO:0005525
Gso17g2148 529 Pfam GTP-binding GTPase Middle Region 221 298 IPR032305 -
Gso17g2148 529 PRINTS GTP1/OBG GTP-binding protein family signature 306 326 IPR006073 GO:0005525
Gso17g2148 529 PRINTS GTP1/OBG GTP-binding protein family signature 373 391 IPR006073 GO:0005525
Gso17g2148 529 TIGRFAM small_GTP: small GTP-binding protein domain 305 459 IPR005225 GO:0005525
Gso17g2148 529 Gene3D - 303 471 IPR027417 -
Gso17g2148 529 Coils Coil 277 297 - -
Gso17g2148 529 Pfam 50S ribosome-binding GTPase 306 424 IPR006073 GO:0005525
Gso17g2148 529 Gene3D - 222 289 - -
Gso17g2148 529 PANTHER GTP-BINDING PROTEIN 6-RELATED 83 514 - -
Gso17g2148 529 Pfam HflX C-terminal domain 436 504 IPR045498 -
Gso17g2148 529 Pfam GTP-binding GTPase N-terminal 129 218 IPR025121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2148 Gso-Chr17 41129177 41136371 Dispersed