Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2142 ATGGGATCAGCTTGTTGTGTTGCTGCAAAGGATCCTAATCTTCCTAACAGAACTGGGGATGAAAGTTTGCATAGAGATGTTGTGTGTTCGCCATCATGGAGCTTTCAATGGGATAGCCGGGGGCGTGTTGCTGATGAAATTGAGAATCCTTCATATCACACATCCCATGTGGACAGTAGAAATGTCAGCATGGAGTTAAAAGGTTCGTTAAGTTCTGAAAGAGGTAATTTATCTGATGGTGGAAGCATCCTGGAGAATTCTGTAACTCCTATTTCTCTGAAGTCCCCTGTTGATGAGGCATTGGTTGCAAATCTGATGACCCCCTCTTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAACCCGGCGGAATCTTCAATACCAAATCTTTCTTTTTCAATACCTTCAGTCTTCTCAACGCCTACAGCAGATCCTTTGCCTAATCACAATTATCACCATCTTCCCAACTCTACTCCAACAAGATGGGCACATCGATCTCCAGCACACCCTCTGTTGAGACAGATTTCTGATAGTCGAATCATGGGTCTGAAATCGCCAGACAACTCAATTTCTGAAGGTAGGCCATCATTTGTACTCTCAACTTGCAGCAATGAAATGGCAGCTGGATCCATATGCGGATCATCTGATGGCTGGTCAATGCGCACCTTTTCTGAGCTGGTTGCATCATCACAAAGGGAAAGGTGGTCCTTTGATAGTGAGTGTTTTGGATCTGGTCGTCACAAGATAAGTGGATCCAGTAGCAGGTTCTCGTATTCTCCCTCCATGGAACTACAATCTTGTGGGGCTTGCTCAAAGCTATTGACCGAGAGATCAACATGGAGCAACCAGAAGTTTATTGCCAACAGTGACCTCTCAGTTGTTGCTGTACTAGTCTGTGGTCATTCATATCATGCAGAATGTTTAGAGGCTATGACATCAGAGGCAGATAGGTATGATCCAGCATGTCCAATTTGTATGGTTGGAGATAAGAACTTGTCAAAGTTGTTGTCCAGAAAAGGTCTTCGGGCTGAATCAGAGATGAAGGCCAAGAACCACAAGATATCCAGAAACCGTGTAGTTGATAGCTACCTTGATGGTGGTTTTGATGTTTTTGATCGTCAAAAAGATATAGATTTGAGAGGAAAAGTGTCAAAAATGGAACCTAGCTGCAGTGCAAGGAGCTCATTTGGAAAGCCATTCTTGAGGAGACACTTTTCACTTGGATCAAAGTGGAGCCGATCCCTGTCCGAGAATGATTCTGCCAGGAAGAAAGGCTTTTGGGCAAGATATCGTTAA 1305 0.4391 MGSACCVAAKDPNLPNRTGDESLHRDVVCSPSWSFQWDSRGRVADEIENPSYHTSHVDSRNVSMELKGSLSSERGNLSDGGSILENSVTPISLKSPVDEALVANLMTPSSDLSMSSNFSTVVKNPAESSIPNLSFSIPSVFSTPTADPLPNHNYHHLPNSTPTRWAHRSPAHPLLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNEMAAGSICGSSDGWSMRTFSELVASSQRERWSFDSECFGSGRHKISGSSSRFSYSPSMELQSCGACSKLLTERSTWSNQKFIANSDLSVVAVLVCGHSYHAECLEAMTSEADRYDPACPICMVGDKNLSKLLSRKGLRAESEMKAKNHKISRNRVVDSYLDGGFDVFDRQKDIDLRGKVSKMEPSCSARSSFGKPFLRRHFSLGSKWSRSLSENDSARKKGFWARYR* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2142 434 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
Gso17g2142 434 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 430 - -
Gso17g2142 434 SMART ring_2 270 328 IPR001841 -
Gso17g2142 434 PANTHER EXPRESSED PROTEIN 1 430 - -
Gso17g2142 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 330 IPR013083 -
Gso17g2142 434 SUPERFAMILY RING/U-box 265 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2142 Gso-Chr17 41097887 41101435 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0611 14 5979395 5983366 Gso17g2142 17 41097887 41101435 GST