Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2141 ATGGCCTCATCTAGTGGAACATCGAGCACGTCCATTCTTCTTCAGAGCTCTGGCTCTGAGGAGGATTTGCAGCTTCTGATGGAACAAAGAAAAAAGAAGAGAAAGCAATCGAACCGCGAATCGGCCAGAAGATCAAGAATGAGAAAGCAGAAGCACTTGGATGATCTCATTGCACAAGTTGACCTCCTCAAGAAACAAAAGAGCCTAACCCTCAAGAAAGTGAACATCACCACACAACACTGTCTCAAGGTTGAGGCTGAAAATTCCATTCTCAGGGCCCAGAAGACTGAACTCACACAAAGCCTTCAATCACTCAATGATATCATCAATCTCATCAACACGACCACCACTTTTGATCATAACAATTATTATTACAATAATAATAATAATAATAACAATAATAATAATTTCATGATGAATCCCATGCACATGGCATATCTTAACCAACCAATTGTGGCCACTGCAGACAACAACATGTTTCTGTGGTGA 489 0.4049 MASSSGTSSTSILLQSSGSEEDLQLLMEQRKKKRKQSNRESARRSRMRKQKHLDDLIAQVDLLKKQKSLTLKKVNITTQHCLKVEAENSILRAQKTELTQSLQSLNDIINLINTTTTFDHNNYYYNNNNNNNNNNNFMMNPMHMAYLNQPIVATADNNMFLW* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2141 162 MobiDBLite consensus disorder prediction 1 51 - -
Gso17g2141 162 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 157 - -
Gso17g2141 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Gso17g2141 162 Pfam bZIP transcription factor 29 84 IPR004827 GO:0003700|GO:0006355
Gso17g2141 162 Gene3D - 28 84 - -
Gso17g2141 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Gso17g2141 162 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Gso17g2141 162 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Gso17g2141 162 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Gso17g2141 162 MobiDBLite consensus disorder prediction 1 23 - -
Gso17g2141 162 PANTHER BZIP TRANSCRIPTION FACTOR 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2141 Gso-Chr17 41093887 41095404 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso17g2141 bZIP_1 1.1e-07 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0612 14 5986037 5987574 Gso17g2141 17 41093887 41095404 GST