Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2133 ATGAAGCTTGGTTTCTTTGTGGTCTTTCTGGTTCTCTATATGATACTAGAACGTGGGATCTTGTTATTACCCCAAGTAGAAGCTGATGATCATGATGATGGCTTTGTGAAAGTAAGAGGGGTGCAGCTTATGCTGAATGGGAGCCCCTACTATGCTAACGGTTACAATGCATATTGGTTGATGTATATGGCCTCTGATCCATCTCAGAGAAACAAAGTGTCTTCTGTGTTTCAAAAGGGTACAAACCATGGACTTAACATAGCCAGAACATGGGCTTTCAGTGATGGTGGATACAAGCCCCTACAATACTCTCCTGGATTCTACAATGAAGACTTGTTCCTGGGGCTGGACTTTGTAATATCAGAAGCCAGGAGATATGGGACCAAGCTTGTGTTGAGTTTGGTGAATAACTATGATAACTTTGGAGGAAAGAAACAATATGTGGACTGGGCAAGAAGTGAGGGCCAGACCATAGATTCTGAAGATGATTTCTTCACTAACCCTATAGTGAAGGGATACTACAAAAATCACGTCAAGAGTGTACTTACAAGACGTAATAACTTCACGGGGATCGTTTACAAAGATGATCCAACTATAATGGCTTGGGAACTCATGAATGAAATTAGATGCCCTTCAGATCAATCAGGAAACACGGTTCAGGCTTGGATTACTGAGATGGCATCTTATTTGAAATCCATAGATGGAAACCATTTGCTAGAAGCTGGTCTGGAGGGCTTCTATGGGCTGTCCAAACAAGAGTCTAATCCCAGCTTCCACGTAGGAACAGATTTCATTACAAACAACCAAATCCCTGGCATTGACTTTGCCACAGTTCATTCATACCCTGATCAATGGCTTCCAGGTTCAAGTAATGAAGACCAAATCTTATTTTTGGTTCGTTGGCTCAATGATCACATACAAGATTCACAGAACATTCAGAAGCCAGTTCTGTTTGCGGAGTTTGGAGTAGCAACAAAAAATATCAGTACTGAAGACTCAACATTAAGGGACCAATTTTTCAACTTGGTCTATTCTGCAATCTATTCATCAGCAAGTGATAGCGGGGCAGCTGTTGGTGGCTTGTTTTGGCAACTTCTAGCTGAAGGAATGGATTCTTTTCGAGATGGTTATGAAGTGCCATTAGATGAGAGTTGCTCCACTGCTACTTTGATTGCTCAAGAGTCTCAAAAGCTAAACAGAATCCGGATGAAGATGTTTCCCAGAGTGAAAAATTCTAAGAAGTGGAACAAAGCAAGGGATGTTAGAATCCCACGATGGCAGGGTGGTGGTGCTAATTAA 1299 0.4172 MKLGFFVVFLVLYMILERGILLLPQVEADDHDDGFVKVRGVQLMLNGSPYYANGYNAYWLMYMASDPSQRNKVSSVFQKGTNHGLNIARTWAFSDGGYKPLQYSPGFYNEDLFLGLDFVISEARRYGTKLVLSLVNNYDNFGGKKQYVDWARSEGQTIDSEDDFFTNPIVKGYYKNHVKSVLTRRNNFTGIVYKDDPTIMAWELMNEIRCPSDQSGNTVQAWITEMASYLKSIDGNHLLEAGLEGFYGLSKQESNPSFHVGTDFITNNQIPGIDFATVHSYPDQWLPGSSNEDQILFLVRWLNDHIQDSQNIQKPVLFAEFGVATKNISTEDSTLRDQFFNLVYSAIYSSASDSGAAVGGLFWQLLAEGMDSFRDGYEVPLDESCSTATLIAQESQKLNRIRMKMFPRVKNSKKWNKARDVRIPRWQGGGAN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2133 432 Gene3D Glycosidases 31 402 - -
Gso17g2133 432 Pfam Cellulase (glycosyl hydrolase family 5) 53 328 IPR001547 GO:0004553|GO:0071704
Gso17g2133 432 PANTHER - 5 423 IPR045053 GO:0004553
Gso17g2133 432 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 5 423 - -
Gso17g2133 432 SUPERFAMILY (Trans)glycosidases 35 388 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2133 Gso-Chr17 41024122 41028068 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0620 14 6089080 6094232 Gso17g2133 17 41024122 41028068 GST
Gso17g2133 17 41024122 41028068 Gso4g0268 4 2454216 2458679 PCT
Gso17g2133 17 41024122 41028068 Gso6g0247 6 2386971 2391314 PCT
Gso4g0268 4 2454216 2458679 Gso17g2133 17 41024122 41028068 PCT
Gso6g0247 6 2386971 2391314 Gso17g2133 17 41024122 41028068 PCT