Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2125 ATGAGCTGGAGAACCCTAGCTTCCACTTCAAGACACACTTTCAAGAGACTCAATGCAATCCTACGATCCCCTTCCACCACCATCCCTTCTTCACGCGCCTCCTCCTCACTCTTCCTCCACGTGCCGTTCTCCACCACCACCCTACATTCCCTGCCACAACCCACCAACGCCCTCATCGACCCTAAACTCCTCGCTCCGCAAAACGACGCCGTCAACAACAACGACGACGAAACCACGAACGAGTTCTTATCTCGATTCGTGTGGATAATGCGGAAGAAGGTGAAGGAAGCGTACCCTGACTCCGACAAGCCCACCGTCGACGGCATGCTCGTCGCCATCGTCGAGATGGTCGTCTCGGAGATGGAAAAGGGTAACATCGGAACGACGTCGTCGTTGTTTTGTTCTGCTGATTTCAGCGAGGATTTGTGGAGAACGGTGTGGGAGGTGAGCAGTCTGGTGCTGGAGGACATGAACAAGGAGATAAAAAAAGAGAAAATGAAGAGCTTCTTGCAGTGCGAGGAGGTTAAGGAGATGTGTAGATTCGCCGGAGAAGTCGGCATTCGGGGCGATTTGCTCAGGGAGCTTAGGTTCAAGTGGGCACGTGAGAAGATGGAGGAACATGAATTCTATGAGGGTTTGGAGAGATTGAGAGAAGAGGCACGAAGTGAGGGCAATGGAATTGGTGTTATTACTGAGAAGAAGGAGAAGGTGAAAGAGAAGGTTGTTGTTGGACTTCCCAAGAGGAGAGGGAACATAAGGTACAAGATCTATGGGCTTGATCTCTCGGATTCCAAGTGGGCACAAGTGGCTGATAGGATACATGAGGCCGAGCAGGTGTTTTGGCCGCAGGAGCCGAAGCCAATTACCGGGAAAGCAAAGATTGTTATCGCCAAGATTCTGTCCTCGAAGGAGGAGGATGACGATGGTTTGCAAAGCCTGTTGGCTGAGTGGGTGGAGCTTGTGCAACCTAGCAGGGTGGAATGGATGGATTTGCTCGACAAATTGAAAGAGCAGAATCATGGTTTGTACTTGAAGGTGGCTGAAATGGTATTGGCTGAAGATTCTTTCCAAACAAATGTATCTGACTACTCTAGGCTTATTGATATCTATGCTAAAGAGAACCGCTTTGATGATGTTGAGAGAATGTTAAAGAAACTGAATGAAAATGGTCTACAAGTAGATGCTTCAATAGCCAGTACTTTGGTCCTCATGTACTGCAAGGGAGGCAATCTTGCACGTGCAACTGAAGCATTTGGAGTCTTGACAAGCCTGGGCTTCCAACCAGATGCACATGTCTACAACTCAATGATCATGACATTTGTGAATAATGGCCAGCCTAAGTTGGGCGAGAAATTGATGAGGGACATGGATGATAGACTTATTACAATCACAAAGGACATATACATGGCATTGCTCCGTTCTTATTCTCAACTTGGTGATGTTGCAAGCGCTGAACGAATTTCAACAACTATGCAATTTGCAGGAATCCAGCAGAGTACGGATAAGGAGACATGCACCCTGCTTGTTGAGGCATATGCACTTGCCAGTAACCCTGATCAGGCAAGAAGCCATTTTGACTGCATGATAAAATCTGGGCATCAGCCTGATGATAGGTGCACTGCTAGCATGATTTTGGCTTACGAGAAGAAAAACGACTTGGACAATGCTTTAAATCTTCTTTTGGAGTTAGAAAAGGATGGGTTTGAGCCTGGGGTTGCCACTTATTCTGTTCTTGTGGACTGGTTGGGTAAGTTGCAGCTTGTTGATGAGGCTGAGCAGCTTTTAGGCAAAATAGCTCTGCTGGGTGAGGCTCCTCCCTTTAAGCTTCAAGTAAGTCTTTGTGATATGTATGCAAGGGCTGGAAATGAGAAAAAAGCCCTTCAAAGTCTAGGCGTTCTGGAAGCTAGGAAGGATGAATTAGGTCAAGCTGAGTTTGAGAGAATTATAAGTGGCCTTATTGATGGTGGGTTTCAGAAGGATGCACAAAGAATATGTCAGATCATGGAGGCACAGGGTTTTGATGCATCAAGGGTTAAGTTTAAACTTTCGAAACCTGTCTCCAGAGCACCGAGTTTGAGATAG 2082 0.4697 MSWRTLASTSRHTFKRLNAILRSPSTTIPSSRASSSLFLHVPFSTTTLHSLPQPTNALIDPKLLAPQNDAVNNNDDETTNEFLSRFVWIMRKKVKEAYPDSDKPTVDGMLVAIVEMVVSEMEKGNIGTTSSLFCSADFSEDLWRTVWEVSSLVLEDMNKEIKKEKMKSFLQCEEVKEMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYEGLERLREEARSEGNGIGVITEKKEKVKEKVVVGLPKRRGNIRYKIYGLDLSDSKWAQVADRIHEAEQVFWPQEPKPITGKAKIVIAKILSSKEEDDDGLQSLLAEWVELVQPSRVEWMDLLDKLKEQNHGLYLKVAEMVLAEDSFQTNVSDYSRLIDIYAKENRFDDVERMLKKLNENGLQVDASIASTLVLMYCKGGNLARATEAFGVLTSLGFQPDAHVYNSMIMTFVNNGQPKLGEKLMRDMDDRLITITKDIYMALLRSYSQLGDVASAERISTTMQFAGIQQSTDKETCTLLVEAYALASNPDQARSHFDCMIKSGHQPDDRCTASMILAYEKKNDLDNALNLLLELEKDGFEPGVATYSVLVDWLGKLQLVDEAEQLLGKIALLGEAPPFKLQVSLCDMYARAGNEKKALQSLGVLEARKDELGQAEFERIISGLIDGGFQKDAQRICQIMEAQGFDASRVKFKLSKPVSRAPSLR* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2125 693 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 536 570 IPR002885 -
Gso17g2125 693 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 359 393 IPR002885 -
Gso17g2125 693 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL 7 687 - -
Gso17g2125 693 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 394 428 IPR002885 -
Gso17g2125 693 Coils Coil 369 389 - -
Gso17g2125 693 Gene3D Tetratricopeptide repeat domain 499 686 IPR011990 GO:0005515
Gso17g2125 693 Gene3D Tetratricopeptide repeat domain 335 498 IPR011990 GO:0005515
Gso17g2125 693 Pfam PPR repeat 542 568 IPR002885 -
Gso17g2125 693 Pfam PPR repeat 574 598 IPR002885 -
Gso17g2125 693 Pfam PPR repeat 363 391 IPR002885 -
Gso17g2125 693 Pfam PPR repeat 432 458 IPR002885 -
Gso17g2125 693 Pfam PPR repeat 504 532 IPR002885 -
Gso17g2125 693 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 501 535 IPR002885 -
Gso17g2125 693 PANTHER OS07G0661900 PROTEIN 7 687 IPR044657 -
Gso17g2125 693 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 429 463 IPR002885 -
Gso17g2125 693 TIGRFAM PPR: pentatricopeptide repeat domain 363 394 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2125 Gso-Chr17 40960740 40963536 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0628 14 6163129 6165819 Gso17g2125 17 40960740 40963536 GST