Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2122 ATGACAGTGACGAGTGGAGAAGAAGAAGGCGCCGTTGGAGGAGTTCAGATCCAACACAGGAGCAGAATGGTGCTCCCAGATTTTCTCCAGAGCGTGAATCTCAAGTACGTGAAATTAGGTTACCACTACTTGATCTCCAACCTCGTAACCTTATTCCTTGTCCCTCTTATCCTCGTCACGCTCATTCAGGTTTTTCAGACCACCGACATCGACCACCTCCGCCACCTCTGGCTCCACCTCCAGTACAACCTCCTCACCATCCTCACCTGCTCCGCCGTCCTCGTCTTCGGCCTCACTCTCTACGCCGTCACGCGCCCCCGCGCCGTCTACCTCCTCGACTCCGCCTGCTTCCGCCCCGCCGACCACCTCAAGGCCCCCTTCCGTAGCTTCATGGATCACTCCCGCCTCACGGGAGACTTCGAGGACTCCTCGCTGGAATTCCAGCGAAAGATCCTCGAACGCTCTGGCCTCGGGGAGGAAACCTACGTCCCCGAGGCCATGCACTCTATTCCGCCCCAGCCCTCCATGGCCGCGGCCAGGGCCGAGGCGGAACAGGTCATGTTCGGTGCCTTGGATAAACTTTTCCAAGGCACCAACATAAAACCAAAGGATATTGGTATTCTTATTGTGAATTGTAGCTTGTTTAACCCTACTCCCTCACTGTCTGCCATGATTGTTAATAAGTACAAATTGAGGGGTAACATTAGGAGCTTTAATTTGGGAGGGATGGGGTGCAGTGCTGGAGTCATTGCTGTTGATCTTGCTAAGGACCTCTTGCAGGTTCATAGGAACACTTATGCTGTGGTTGTTAGCACTGAGAACATTACTCAGAATTGGTACTTTGGGAACAAGAAATCCATGCTCATTCCCAATTGCCTATTTCGTGTGGGCTGCTCTGCGCTGCTTCTCTCTAACAAGCCGGCAGATCGAAGGAGGGCCAAGTACCGGCTTGTCCACGTCGTGAGGACTCATCGCGGGGCCGACGACAAGGCGTTCCGGTGTGTTTACCAGGAGCAGGATGATGCTGGGAAAACTGGTGTTTCCTTGTCTAAGGATTTGATGGCAATTGCTGGTGGAGCATTGAAGACTAACATCACCACACTTGGTCCTCTGGTGCTGCCAATTAGTGAGCAGCTTCTGTTTTTCGTGACTCTGCTGATGAACAAGTTATTTAAGGCTGGTGTGAAGCCTTACATACCGGATTTCAAGCTTGCATTTGATCATTTTTGTATCCATGCTGGTGGCAGGGCTGTGATTGATGAGTTGGAGAAGAACCTGCAGCTGCTTCCTGAGCATGTGGAGGCTTCTAGGATGACCCTTCATAGATTTGGGAACACTTCCTCAAGCTCCATTTGGTATGAGTTGGCTTACATTGAAGCCAAAGGGAGGATCAAGAAGGGTAACAGGATTTGGCAAATTGCGTTTGGAAGTGGTTTCAAGTGTAACAGTGCGGTTTGGCAGGCTCTGAGGAATGTGAGGCCTTCTCCTAATGGACCATGGGAAGATTGCATTCATAAGTATCCTGTGGAAATAGTCACATAG 1542 0.5117 MTVTSGEEEGAVGGVQIQHRSRMVLPDFLQSVNLKYVKLGYHYLISNLVTLFLVPLILVTLIQVFQTTDIDHLRHLWLHLQYNLLTILTCSAVLVFGLTLYAVTRPRAVYLLDSACFRPADHLKAPFRSFMDHSRLTGDFEDSSLEFQRKILERSGLGEETYVPEAMHSIPPQPSMAAARAEAEQVMFGALDKLFQGTNIKPKDIGILIVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMNKLFKAGVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRIKKGNRIWQIAFGSGFKCNSAVWQALRNVRPSPNGPWEDCIHKYPVEIVT* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2122 513 CDD CHS_like 91 486 - -
Gso17g2122 513 PIRSF Very_long_ch_3-ktacl-CoA_syn 27 513 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gso17g2122 513 SUPERFAMILY Thiolase-like 95 313 IPR016039 GO:0016746
Gso17g2122 513 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 406 487 IPR013747 -
Gso17g2122 513 PANTHER 3-KETOACYL-COA SYNTHASE 19 512 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gso17g2122 513 Pfam FAE1/Type III polyketide synthase-like protein 101 389 IPR013601 GO:0006633|GO:0016020|GO:0016747
Gso17g2122 513 PANTHER 3-KETOACYL-COA SYNTHASE 4 19 512 - -
Gso17g2122 513 SUPERFAMILY Thiolase-like 318 487 IPR016039 GO:0016746
Gso17g2122 513 Gene3D - 129 488 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2122 Gso-Chr17 40933653 40935955 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0632 14 6209354 6211417 Gso17g2122 17 40933653 40935955 GST