Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2104 ATGGCCGACGACGGAGCAACCTCGGCGGCGACGAGCCGGAGAAAGCCGTCGTGGAGAGAAAGAGAGAACAACAGAAGAAGAGAAAGACGAAGAAGAGCAATAGCAGCGAAAATATACTCAGGACTTCGAGCTCAGGGGAACTTCAACTTGCCAAAGCACTGCGACAACAACGAAGTTCTGAAAGCTCTCTGCGCAGAAGCTGGTTGGTGCGTAGAAGAAGACGGAACCACTTATCGCAAGGGTTGCAAGCCGCCTCTAGCCAATGGTGCTGGGAGCTCCATGAGAAACATTCCCTTTTCTTCTTCTCAAAATCCAAGTCCTCTTTCTTCATCATTTCCCAGCCCAATTCCTTCATACCAAGTTAGCCCTTCCTCCTCCTCTTTGCCAAGCCCGTTTCGTTTAGATGGGGATAAGGACAATGTATCAAACCTCATTCCATACATTCGCAATGCGTCCGTGTCTCTTCCTCCTCTCAGGATATCAAACAGTGCCCCTGTGACACCACCTCTTTCATCACCAACATCAAGAAATTCAAAACCAATTCCTACATGGGAGTCTATTGCCAAAGAATCCATGGCCTCCTTCAATTACCCTTTCTTTGCAGCTTCTGCCCCTGCTAGCCCCACGCACCGTCACCTTTACACCCCTCTCACTATTCCAGAATGCGATGAGTCCGATACTTCCATTGGTGAGTCTGGCCAGTGGGTGAAATTCCAAGCATTTGCTCCTTCTGCATCTGTGTTCCCAACTTCTCCAACCTTCAATCTTGTTAAACCTGTGATTCCGCACAGGATGCCTGATAACTCAATCCAAGTGATGAGGACGAGTTCAGAAGAGTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAAAAAATTCATGAAGTGGCATTGGATGATTTAGAGCTCACACTTGGAAGTGGGAAGGTGCGGAGTTAG 936 0.4861 MADDGATSAATSRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKPPLANGAGSSMRNIPFSSSQNPSPLSSSFPSPIPSYQVSPSSSSLPSPFRLDGDKDNVSNLIPYIRNASVSLPPLRISNSAPVTPPLSSPTSRNSKPIPTWESIAKESMASFNYPFFAASAPASPTHRHLYTPLTIPECDESDTSIGESGQWVKFQAFAPSASVFPTSPTFNLVKPVIPHRMPDNSIQVMRTSSEEFGVQVKPWVGEKIHEVALDDLELTLGSGKVRS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2104 311 MobiDBLite consensus disorder prediction 14 29 - -
Gso17g2104 311 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 151 IPR008540 -
Gso17g2104 311 MobiDBLite consensus disorder prediction 1 30 - -
Gso17g2104 311 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 310 - -
Gso17g2104 311 MobiDBLite consensus disorder prediction 87 135 - -
Gso17g2104 311 MobiDBLite consensus disorder prediction 93 131 - -
Gso17g2104 311 MobiDBLite consensus disorder prediction 162 181 - -
Gso17g2104 311 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2104 Gso-Chr17 40766619 40769362 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gso17g2104 BES1_N 5.3e-61 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0651 14 6448529 6452856 Gso17g2104 17 40766619 40769362 GST
Gso17g2104 17 40766619 40769362 Gso4g0297 4 2673675 2675720 PCT
Gso17g2104 17 40766619 40769362 Gso6g0281 6 2606169 2608115 PCT
Gso4g0297 4 2673675 2675720 Gso17g2104 17 40766619 40769362 PCT
Gso6g0281 6 2606169 2608115 Gso17g2104 17 40766619 40769362 PCT