Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2099 ATGGCTCTAATCCCAAACTCAAAAACCTCTGCACTCTTCCACCTGCTCCTCTTCTTATTAGGCAATGTAGCATATGCCACAGTGTTTACCCTGGAGAATCATTGCAGTTACACAGTTTGGCCCGGCACACTTTCCGGCAACGGCGCTGCCCTTCTCGGCGAAGGCGGTTTCGCCCTGGCACCCGGTTCGGCGGTCCAGCTCACCGCGCCGGCTGGCTGGTCCGGCCGCTTCTGGGCCCGGACCGGGTGCAGCTTCGACGCCTCCGGAAGCGGAAAATGTGTCACCGGAGACTGCGGCAGCGGACTGAAGTGCAGCGGCGGAGGCGTTCCGCCGGCGACTCTGGCGGAATTCACCCTCGGAAGCGCCAGCAACGGCAACAAGGACTTCTACGACGTGAGCCTGGTGGACGGTTACAATGTGGGCATGGGTGTGCGGGCTACCGGCGGAACCGGTGACTGCCAGTACGCGGGGTGCGTGGCGGACGTGAACGGTGTTTGCCCGGCGGAGCTGCAGGTGAGAGACGGCAGCGGCGCGGTGGTGGCGTGCAAGAGTGCGTGCTTGGCGTTGAATACGGCGGAGTATTGCTGCACCGGCGACCACAACACGCCGCAGACATGTCCGCCGACGCATTATTCGGAGATATTCAAGAATGCGTGTCCCACAGCGTACAGTTACGCATACGATGATGCGTCGAGCACTTGCACGTGTTCTGGATCAGATTACCGTATCACATTTTGCTCCACGTGA 747 0.6078 MALIPNSKTSALFHLLLFLLGNVAYATVFTLENHCSYTVWPGTLSGNGAALLGEGGFALAPGSAVQLTAPAGWSGRFWARTGCSFDASGSGKCVTGDCGSGLKCSGGGVPPATLAEFTLGSASNGNKDFYDVSLVDGYNVGMGVRATGGTGDCQYAGCVADVNGVCPAELQVRDGSGAVVACKSACLALNTAEYCCTGDHNTPQTCPPTHYSEIFKNACPTAYSYAYDDASSTCTCSGSDYRITFCST* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2099 248 SUPERFAMILY Osmotin, thaumatin-like protein 28 246 IPR037176 -
Gso17g2099 248 Pfam Thaumatin family 33 246 IPR001938 -
Gso17g2099 248 SMART tha2 29 247 IPR001938 -
Gso17g2099 248 Gene3D Thaumatin 27 246 IPR037176 -
Gso17g2099 248 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Gso17g2099 248 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Gso17g2099 248 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Gso17g2099 248 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Gso17g2099 248 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Gso17g2099 248 ProSiteProfiles Thaumatin family profile. 26 248 IPR001938 -
Gso17g2099 248 PANTHER OS03G0233200 PROTEIN 23 247 IPR001938 -
Gso17g2099 248 PIRSF PR5 2 248 IPR001938 -
Gso17g2099 248 CDD TLP-PA 28 246 - -
Gso17g2099 248 PANTHER PATHOGENESIS-RELATED PROTEIN 5 23 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2099 Gso-Chr17 40705826 40707557 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0655 14 6508832 6510746 Gso17g2099 17 40705826 40707557 GST