Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2097 ATGAAGTCCAATCCAAAATCAAAAACACCACCCCACTTATTATACTACCTTCTAATAATCCTCTCCTTACTGTTCTTCTTCCCGTGTGTATCCTCTACCCAACAATTCAAAGAAGCCCCTCAATTCTACAACTCCCCAAACTGCCCCTCAATTGAACACAACATATGCTCCGAGGAAGCCGTCCACGTGGCAATGACACTCGACACGACATACATCCGAGGATCCATGGCGGCGATCCTTTCCGTCCTCCAACACTCTTCGTGCCCCCAAAACACCTTCTTCCACTTCGTGTGCTCCTCCAATGACAACACCAACGCGTCCCTCCTACGCGCCACAATCTCCAACACATTCCCCTACCTGAATTTCCAACTCTACCCCTTCCACGACGCCGTCGTTTCGGGCCTCATCTCCACCTCCATCCGCGCCGCACTCGATTGCCCCCTCAACTACGCGCGCAGCTACTTGGCCAACCTCATCCCGCCCTGCGTGAAGCGCGTGGTGTACCTCGACTCCGACCTCGTACTCGTCGACGACATCGCCAAGCTCGCGACAACCTCGTTGGGAGAAAACAACAACGTTTTGGCGGCGCCGGAATATTGCAACGCGAACTTCACCTCGTACTTCACTCCCACGTTCTGGTCGAACCCTTCTCTGTCGCTAACGTTCGCGGACAGAAAACAGAAAGCGTGTTACTTTAACACGGGGGTGATGGTGATTGATTTGGAACGGTGGCGCGAAGGGGATTACACGAGAAAAATCGAGGAGTGGATGGAGCTTCAGAAGAGGATGAGAATCTACGAACTTGGTTCGTTGCCGCCGTTTTTGCTTGTGTTTGCGGGGAACATTGTTTCGGTGGATCATAGGTGGAACCAACATGGTTTAGGAGGGGACAATTTTCGAGGTCTGTGTCGGGATCTGCACCCAGGTCCGGTGAGTTTGTTGCATTGGAGTGGGAAGGGGAAACCATGGGTGAGATTGGACGCTAACAGGCCTTGTCCTTTGGATGCGCTTTGGGCACCTTATGATCTATTACGTACCCCCTTTTCTTTCGACTCTTGA 1059 0.5231 MKSNPKSKTPPHLLYYLLIILSLLFFFPCVSSTQQFKEAPQFYNSPNCPSIEHNICSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNTFFHFVCSSNDNTNASLLRATISNTFPYLNFQLYPFHDAVVSGLISTSIRAALDCPLNYARSYLANLIPPCVKRVVYLDSDLVLVDDIAKLATTSLGENNNVLAAPEYCNANFTSYFTPTFWSNPSLSLTFADRKQKACYFNTGVMVIDLERWREGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGNIVSVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLRTPFSFDS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2097 352 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 62 332 IPR029044 -
Gso17g2097 352 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 8 352 - -
Gso17g2097 352 SUPERFAMILY Nucleotide-diphospho-sugar transferases 61 343 IPR029044 -
Gso17g2097 352 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 8 352 - -
Gso17g2097 352 Pfam Glycosyl transferase family 8 62 325 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2097 Gso-Chr17 40683920 40685658 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0658 14 6547740 6549559 Gso17g2097 17 40683920 40685658 GST
Gso17g2097 17 40683920 40685658 Gso4g0304 4 2748197 2749876 PCT
Gso17g2097 17 40683920 40685658 Gso6g0286 6 2680518 2682340 PCT
Gso4g0304 4 2748197 2749876 Gso17g2097 17 40683920 40685658 PCT
Gso6g0286 6 2680518 2682340 Gso17g2097 17 40683920 40685658 PCT