Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2096 ATGTTCACACTTTGTTTTTCAGTCTTGTTTAGTCAAGAGCACAATCTCACCATGAATCATCATGTTGTGTTTCTCTTCACACTAACCTTGTTTCTTGTTTCTTTTGATGCCAAAGCACAGCAGAATTACACAGGAAATTCAATATTCAGCTGCAAGAATGATGACAAAATGGGGGCTTCACCTTCCTTCCTTTACACTTGCAATGGCCTCAACAAATCCTGCCTGGCCTTCCTCATCTTCAAATCAAAACCTCCTTTCAATTCCATAGCCACAATCTCCAACCTCACATCATCAAACCCAGAAGAGCTTGCAAGAATCAATGATGTCACTGTGCTCAAAGTGTTCCCAACTGGGAAAGAAGTGCTTGTCCCTTTGAACTGTTCTTGCTTAACAAGGGACTATTACCAAGCTGAAACCAACTATGTATTGGGGCAATCCCCAACATATTTGACAGTGGCAAATGATACTTTACAGGGTTTGACCACTTGTGATTCGCTTATGCGTGCTAATCCATACGGGGAACTTGATTTGCATCCCGGCATGGAATTGCACGTGCCACTCAGATGTGCTTGTCCAACATGGCATCAGATCACAAACGGCACCAAGTATTTGCTGACATACTCAGTGAATTGGGGTGATAACATTACAAATATTGCTGCAAGGTTCAATGTAGCAGCAGGTAATGTGGTTGATGCCAATGGTTTTTCCACACAAACACAAACTATTTTTCCATTCACAACTGTTCTGATTCCTTTGCCAAGTGAACCTGTGAGTTCAATGACAAGAATTGTTAGTGATCCACCAGATGTGTCACCTCTTGTTTGCAGCTCCAAAAAGTGCAACTCAAAGAGGAAACTTTACACTGTTATTGCCACCACTGGGGGTTCCATGCTGGTTCTTTGTGTCGTCTTATATGGGGTTTTTCTGTTCAGAAAGAGATCAGCAATGTTCATTAAGCGAGGTGAACAAGGTGAGAAATCAAAGAAGTTGTCTTCAGAAGATATCCGTGGTGAGATAGCAATCATTGAACATCACTCCAAGGTGTACAAGTTTGAGGAAATAGAGAAGGCCACTGAAAACTTTAGTTCAAAGAATAGAATCAAAGGTTCTGTGTATCGTGGGGTATTCGGTAAAGAGAAGAACATATTGGCTGTCAAGAAAATGAGAGGGGATGCATCCAAGGAAGTGAATTTGCTGGAAAAGATCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAAACGATGGTTGCCCCTATCTTGTTTATGAGTATATGGAAAATGGCTCTTTGAGAGAATGGCTAAGCAGAAACGGGTCAACGGAGCACCAGAGTTTGGCAAGGAGGATCCTGATTGCTCTGGATGTTGCCAATGGTCTTCAGTATCTTCACAACTTCACAGAACCTTGCTATGTGCACAGGAACATAAACAGTGGAAGCATTCTGCTAAACAAAGATCTAAGGGCCAAGATAGCAGACTTTGCTCTTGCTGAAGAATCAGAAAGTAAAATAACTTCCGGTTGTGCCTCATCACACATCGCGAAATCAAGGGGCTATATGGCTCCGGAGTATCTGGAGGCAGGGAAGGTCACTACCAAAATGGATGTTTTTGCCTTCGGAGTGGTGCTGTTGGAATTGATCACGGGTAAAGATTCTGTTACCCTACAAGATGGGAGAGAAGTAATGCTTCGTGCATTCATAGTAAATCTCATTGGTAAAGAGGATGAAGAAGAGAAGGAGAGTTTGTTCATTGATCCGAGCCTCAATGGAAACATTGAGAAAGTATGGGCTCTCCAGCTAGTTAAACTTGGTCTAGCCTGCTTGATCCAGGAATCAGCAGAGAGACCAACCATGGTAGAGGTAGTCTCTAGCTTATTGAAAACATATACAAGTTATATGGAGCAAATAATACCACCTAGCATCAGCAACAGTCCTAGCATGGAGAGGTGA 1953 0.4229 MFTLCFSVLFSQEHNLTMNHHVVFLFTLTLFLVSFDAKAQQNYTGNSIFSCKNDDKMGASPSFLYTCNGLNKSCLAFLIFKSKPPFNSIATISNLTSSNPEELARINDVTVLKVFPTGKEVLVPLNCSCLTRDYYQAETNYVLGQSPTYLTVANDTLQGLTTCDSLMRANPYGELDLHPGMELHVPLRCACPTWHQITNGTKYLLTYSVNWGDNITNIAARFNVAAGNVVDANGFSTQTQTIFPFTTVLIPLPSEPVSSMTRIVSDPPDVSPLVCSSKKCNSKRKLYTVIATTGGSMLVLCVVLYGVFLFRKRSAMFIKRGEQGEKSKKLSSEDIRGEIAIIEHHSKVYKFEEIEKATENFSSKNRIKGSVYRGVFGKEKNILAVKKMRGDASKEVNLLEKINHFNLIKLQGYCENDGCPYLVYEYMENGSLREWLSRNGSTEHQSLARRILIALDVANGLQYLHNFTEPCYVHRNINSGSILLNKDLRAKIADFALAEESESKITSGCASSHIAKSRGYMAPEYLEAGKVTTKMDVFAFGVVLLELITGKDSVTLQDGREVMLRAFIVNLIGKEDEEEKESLFIDPSLNGNIEKVWALQLVKLGLACLIQESAERPTMVEVVSSLLKTYTSYMEQIIPPSISNSPSMER* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2096 650 ProSiteProfiles Protein kinase domain profile. 312 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g2096 650 Gene3D Phosphorylase Kinase; domain 1 321 426 - -
Gso17g2096 650 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 18 636 - -
Gso17g2096 650 Gene3D Transferase(Phosphotransferase) domain 1 427 638 - -
Gso17g2096 650 Pfam LysM domain 207 251 IPR018392 -
Gso17g2096 650 Gene3D LysM domain 197 262 IPR036779 -
Gso17g2096 650 ProSiteProfiles LysM domain profile. 205 250 IPR018392 -
Gso17g2096 650 SUPERFAMILY Protein kinase-like (PK-like) 342 638 IPR011009 -
Gso17g2096 650 Pfam Protein tyrosine and serine/threonine kinase 380 624 IPR001245 GO:0004672|GO:0006468
Gso17g2096 650 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 18 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2096 Gso-Chr17 40666739 40668851 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso17g2096 PK_Tyr_Ser-Thr 1.2e-35 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0659 14 6564990 6566783 Gso17g2096 17 40666739 40668851 GST