Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2093 ATGGATTCTCCCTTACTAGAAAACATTGACAACTCTTGTTCTAATGTTGAGGAGGAGAAGACACCGAACACTGTTGTTAAGAGATTTGGGTTTGAGTCGAAGAAGCTATGGAAAATAGCTGGCCCTGCTATCGTTACCTCTATATGTCAGTACTCACTTGGTGCACTCACTCAAACATTTGCTGGCCTTGTTGGTGACCTTGATCTTGCAGCAGTTTCTGTTGAAAATTCTGTTATTGCTGGCCTCGCCTTTGGAGTCATGTTGGGAATGGGAAGTGCCTTGGAGACTCTGTGTGGGCAAGCATACGGTGCAGGACAGATCAGGATGTTGGGTGTGTACATGCAGAGATCATGGGTCATCTTGTTCATCACTGCCCTTATTTTGTTACCTCTTTATATTTGGTCACCTCCCATCTTGAGGCTCGCTGGACAGACGGCTGAGATCTCAGATGCTGCTGGAAAGTTTGCTGTGTGGATGATACCTCAGTTGTTTGCATACGCTATAAACTTTCCAATAGTAAAGTTCCTACAGGCACAGAGGAAAGTGCTGGTGATGTTATGGATATCAGTAGTTGTTTTGGTGCTGCACACATTTTTTAGTTGGCTTGTTATATTTAAGCTTGGATGGGGCCTAATTGGAGCAGCAGTTACTCTCAATACATCATGGTGGGTGATTGTGATTGCACAATTGTTGTACATTTTCATCACTAAGTCAGATGGAGCATGGAGTGGATTTACATGGCTAGCATTTTCGGACTTGTTTGGTTTTGTAAAGCTTTCTTTGGCTTCAGCTGTTATGTTATGCTTGGAGTTTTGGTATTTGATGATACTGGTGGTGATAACAGGGCGTTTGGAAAATCCTCTGATACCTGTTGATGCCATATCTATCTGTATGAACATAAATGGTTGGGATGCCATGATTGCGATTGGGTTCAATGCTGCTATAAGTGTGAGAGTATCAAATGAACTTGGAGCTGGTGATTTCAAGGCTGCAAAGTTTTCAGTGTGGGTGGTTTCCATCACATCAGTGTCCATAGGTGTTGTTGTCATGATCGGAGTGCTATTAACAAAGGATTACTTTCCCTACTTGTTTACCACCAGTGTTCCAGTTGCCAATGAAACAACTAGGCTTTCTGCTTTGCTAGCTGTCACAGTGCTTCTAAACAGCCTTCAACCAGTCCTATCAGGTGTTGCTGTTGGGGCTGGCTGGCAATCTCTAGTAGCATACATCAACATTGTGTGCTACTATCTAGTTGGATTACCGGCAGGGATAATATTGGGATTTAAACTTGGTCTTGGAGCAGAGGGTATTTGGTCAGGGATGATTGCAGGCATAGTTTTGCAGACTACAATCCTTATAATCGTCACTTCAATACGAAACTGGAAAAAAGAGGCTGAAGAAGCAGAAAGCCGCGTGAGAAAGTGGGGAGGAGCAATTTCGTATGATCAATGA 1452 0.4325 MDSPLLENIDNSCSNVEEEKTPNTVVKRFGFESKKLWKIAGPAIVTSICQYSLGALTQTFAGLVGDLDLAAVSVENSVIAGLAFGVMLGMGSALETLCGQAYGAGQIRMLGVYMQRSWVILFITALILLPLYIWSPPILRLAGQTAEISDAAGKFAVWMIPQLFAYAINFPIVKFLQAQRKVLVMLWISVVVLVLHTFFSWLVIFKLGWGLIGAAVTLNTSWWVIVIAQLLYIFITKSDGAWSGFTWLAFSDLFGFVKLSLASAVMLCLEFWYLMILVVITGRLENPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGAGDFKAAKFSVWVVSITSVSIGVVVMIGVLLTKDYFPYLFTTSVPVANETTRLSALLAVTVLLNSLQPVLSGVAVGAGWQSLVAYINIVCYYLVGLPAGIILGFKLGLGAEGIWSGMIAGIVLQTTILIIVTSIRNWKKEAEEAESRVRKWGGAISYDQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2093 483 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso17g2093 483 Pfam MatE 263 423 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso17g2093 483 PANTHER PROTEIN DETOXIFICATION 33 17 469 - -
Gso17g2093 483 PANTHER MULTIDRUG RESISTANCE PROTEIN 17 469 - -
Gso17g2093 483 CDD MATE_eukaryotic 32 467 IPR045069 GO:0042910|GO:1990961
Gso17g2093 483 TIGRFAM matE: MATE efflux family protein 42 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2093 Gso-Chr17 40635552 40642456 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0662 14 6593283 6601618 Gso17g2093 17 40635552 40642456 GST