Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2090 ATGGCGAAATCGAGCGCCGACGACGGTGAGCTCCGGCGAGCTTGCGACGCCGCAATTGAGGACCCGAAGCAGAAGATCGTGATGGCGCTGCGCGTCGCCAAGAGTCACGGCATCTTAGGAAAACCTTCCTCCAAGCTCGGTCGCATGGCCAAGCCTAGGGTTCTCGCTCTCTCCATTGTTGGTGACGACGTGGTGTTTCCTGCAGCGAAATCCAAGGGGCAGAGGACAACGGCTTTTCTTCGAGTTTTGAAGTATTCTACGGGAGGAGTTCTTGAACCTGCAAAACTATACAAGCTAAAGCACCTGTCAAAAGTGGAAGTTGTAGCAAATGATCCCAGTGGATGTACATTTACTCTGGGATTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCTCAATGGACCATGCGCAATATCGATGACAGGAATCGCCTCCTTCTTTGCATCTTGAACATCTGTAAAGATGTTTTGGGCCGCCTTCCTAAGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCACCTGTTTCTGCTCAGAATAAAGTGCGAGATGGTGGTCCTGTTGCATCTGTTGTGACTGAAACAGAAATCACAGAATTGAAAGTCAATGTTGAAAAGGAACTTGTCTCGCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAGGAATTTTCTGAAAGGTTGAAGAGAGAGCTCCAGGCTCTGGAAGCTGCAAATGTGCATGCTCTTTTAGAAAGTGAACCTTTGATGGATGAGGTGTTGCAAGGACTTGATGCCGCAACCAGTGTTGTGGAAGATATGGATGAATGGTTAAGCATATTCAATGTAAAACTCCGGCACATGAGGGAGGATATTGCATCAATAGAAACTCGCAATAACAACCTGGAAATGCAATCAGTAAATAACAAATCTCTCATTGAAGAGCTTGATAAGCTTCTTGAGCGATTGCGTGTCCCTTCTGAGTATGCCACAAGTTTGACAGGAGGTTCATTTGATGAAGCCCGAATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACCAGTGCCTTGCGTGGTCTTGAAATGCCTAATCTAGACCCTAGTTATGCAAACATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCCTCTGAATTCTTGAGAAATTATTTTGCTAGTTTGGTGGACTTCATGATAAGTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTAAAGAGGCCTGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGACAAGAATTGTTTGGGTCCATTGAGGAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGAGAGGCCCGTGAGTTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTTGAAGGTTCCACAGGTTCTGGTCAGAATGTAAATGCTACTGACACTTCCACAGTCTCTGATGCTTATGCAAAGATGCTTACGATTTTCATCCCGCTTCTAGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACACTTGTTCCTCCTGGAGGTGTTGTTAATGGCCACAAAGCTGGATATGATGATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAGCAAATCTGGTAAAAATTCTGTGGAGCTTGAAGCTTTGAATAAATCACTTAAGGATTTACTTGATGGAATACAAGAAGACTTCTATGCTGTTGTGGATTGGGCTTACAAGATTGACCCTTTACGCTGTATATCAATGCACGGAATAACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTGATTTGCTTCGTGACCTGGAGTCTCGGATATCTATGCAGTTCAACCGATTTGTTGACGAAGCTTGCCATCAAATTGAAAGAAATGAACGCAATGTTCGCCAAATGGGTGTCCTATCCTACATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGTCAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCATAATGTTTGCAACTTTAGAAAAAATTGCACAAACAGATCCAAAGTATGCAGATATTTTCCTTTTTGAGAACTATGCTGCTTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCTACTTTGGCCAAGTTTTATCATCAGGCCAGTGAAGCCTATGAACAAGCTTGTACACGCCATATTAGCATGATTATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAGGATTGAAGACTTGATGTTCACTGTTGCACCTGAAGAGATTCCTTTTCAGCTTGGACTGTCAAAAATGGATCTTCGGAAGATGTTAAAATCCAGTTTATCTGGGGTTGACAAGTCCATTGCTGCGATGTATAAGAAACTGCAAAAGAATTTGACTTCGGAGGAATTGTTACCCTCCTTATGGGACAAATGCAAGAAGGAATTTCTTGATAAGTACGAAAGTTTTGCCCAACTCGTGTCTAAGATTTACCCTACTGAGACGATCCCGTCTGTAGCAGAGATGAGAGACCTTTTAGCTTCCATGTAG 2691 0.4329 MAKSSADDGELRRACDAAIEDPKQKIVMALRVAKSHGILGKPSSKLGRMAKPRVLALSIVGDDVVFPAAKSKGQRTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVANDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPPVSAQNKVRDGGPVASVVTETEITELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHALLESEPLMDEVLQGLDAATSVVEDMDEWLSIFNVKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYATSLTGGSFDEARMLQNVEACEWLTSALRGLEMPNLDPSYANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGHKAGYDDDDDLGIMDIDENDSKSGKNSVELEALNKSLKDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRDLLRDLESRISMQFNRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVSKIYPTETIPSVAEMRDLLASM* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2090 896 Coils Coil 294 331 - -
Gso17g2090 896 PANTHER SEC3/SYNTAXIN-RELATED 1 896 - -
Gso17g2090 896 SMART Sec3_PIP2_bind_2 48 156 IPR028258 -
Gso17g2090 896 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 52 154 IPR028258 -
Gso17g2090 896 Pfam Exocyst complex component Sec3 237 498 IPR019160 GO:0000145|GO:0006887
Gso17g2090 896 Pfam Exocyst complex component Sec3 591 879 IPR019160 GO:0000145|GO:0006887
Gso17g2090 896 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 896 - -
Gso17g2090 896 Coils Coil 587 607 - -
Gso17g2090 896 Coils Coil 234 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2090 Gso-Chr17 40596871 40611531 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0665 14 6627003 6631381 Gso17g2090 17 40596871 40611531 GST
Gso17g2090 17 40596871 40611531 Gso4g0305 4 2756414 2769685 PCT
Gso4g0305 4 2756414 2769685 Gso17g2090 17 40596871 40611531 PCT