Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2087 ATGCTAAGAGACGAAAGCGTGGGTTCTAGAAGCGCCAGGCACAGCGCCACCGCCACCGCCACCGTCTCCAACAAGGTTCTCGTTGCCGTCAAGGCCGAGAAGGTCATCTCCAACACCGCATTAGCCTGGGCTCTCACTCATGTCGCTCACTCCACCGACTCCATCACGCTCCTCGCCGTTTACTCTTCTCACAAAACCGGCAGAAGGTTCTGGAATTTTTCGAGACTGGCCGGAGACTGTACGAACGGACCGGCGGGAAAGTTGCCGGAGCAAATTTCCGATATCTCCGAGTCCTGTGCTCAGATGGTGCTTCAGCTGCACAATCAAATCGAGGTTAGGGTGAAGATTAAGGTGGTCACGGGTACTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGCGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGTAAAGCATTGCACGGATGAACTCAACTGTAGCATAGTGGTGATGAATGGTTCACAGGCAAAAATCCTCAGGCTTAACTTACGGTCTTCCAATGAACTTCAAACTCCTTTTTTCTCTGCTAACTCTTCACCAGGTATAGAAATTGCAAAGCTAAAAGGCAGAAGATTGAAGCATTCTACCCCAGTGGGTAGCCCTGAAGAAGCAGGTACTTCTGTTACAAGAAACATAGGAGTAAATTCAGTGTCAAGTTCTGACTCGACAACTTCTCTTTTCCTAGTCTATGAACAAAACCCTCTGTACGAGGGTCAGGGCCCTGAGAAAAGAACAGACGAATCAATCAACGAACCAACAAAAGATTTTCATGTCCAGCCACCATTATACTTTGATCTTGAAAGAGATAGCCCTCCCCCTTCATGGACACGTCCAGCATCATCTGTGGCCAGTGATAACAAGACTATATTTTGGATTCCTCAAAACCACAATATTGTAGACAAGTTTCAGAAAACTAAAAACAACAGTGTTATCCAAAGAACTAAATCCCCAACTTCGAAAACTTTACTTGAGAATTTTATACGTTGTGATCAAGAGATATGGACAAATGAACTTGGGTTTGACCAAGCTCAAAGTAGAAGTTATGTCCCCAACTTGGGCATCAGAGATAATAACTCAGTTCCTTTGGGCAGAACTACCTCTATACCTCCTCCCTTATGCTCACAGTGTAAGAATAAAGCACCAGTATTTGGAAAGCCTCCAAAACGGTTTTCTTACAAAGAGCTAGAGGAAGCTACTGATATGTTCTCGGATGAGAATTTTTTGGCTGAAGGTAGATTTGGTGTGGTCCACCAGGGAATACTCAAAGATGGTCAGGTTGTTGCGGTGAAACAGTTGAAGTTTGGTGGTTCTCAAGCAGATCTTGATTTCTGCAGGGAAGTTCGGGTTTTGAGCTGTGCACAACACAGAAATGTTGTGCTGTTGATAGGATTTTGTATAGAGAGCAATTTGAGGATATTAGTCTATGAGTACATATGCAACGGATCCTTGGACCTCTACTTATATGGAGATGAGAGTATGCCTTTGGATTGGAACTCACGCTTAAAGATAGCAATTGGAACTGCACGAGGCTTACGCTACCTTCATGAAGATTGTAGAGTTGGGTGTATAGCGCACAGAGACCTTCGACCCAAAAATATTCTCGTAACACATGACTTTGAACCTATGGTGGCTGATTTTGGGCTTGCTAGATGGCACTCAGAATGGAATATAGATACTGAAGATCGCGTTATAGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGACGCTGGAAACCTTACATATAAAGTAGATGTATATGCATTTGGAATTGTATTATTAGAGTTAATAACAGGTCGAAGAATTAGCGAGTTGGAACAGTTCAATGGACACTCGTATCTTTCTGAATGGTTTCATCCCATACGCATGTTAGAGCCCGGTCATATCTTACAAAACGTTCGTTCTCTCAAACCATGCTTTGATTCTAAGGAGTCAGTGGAATTTAATCTTCAGTTGCAAGCCATGGCACGGGCTGTTTCGTTGTGTCTACGTGTGGATCCTGATGCAAGACCCCCAATGTCAAAGATCCTGAGAGTGTTGGAAGGGGGTAATCCAGTTCGTCCTATGGGTTTAGACATCAATTCAGTTGGCAACACAAGTGGCCATTTAAGTGGTTTGAAGTCGCACACTCCACCAAAAGGTACAATAAATCATTCCCGTAGACTATCACATTGA 2211 0.4432 MLRDESVGSRSARHSATATATVSNKVLVAVKAEKVISNTALAWALTHVAHSTDSITLLAVYSSHKTGRRFWNFSRLAGDCTNGPAGKLPEQISDISESCAQMVLQLHNQIEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVKHCTDELNCSIVVMNGSQAKILRLNLRSSNELQTPFFSANSSPGIEIAKLKGRRLKHSTPVGSPEEAGTSVTRNIGVNSVSSSDSTTSLFLVYEQNPLYEGQGPEKRTDESINEPTKDFHVQPPLYFDLERDSPPPSWTRPASSVASDNKTIFWIPQNHNIVDKFQKTKNNSVIQRTKSPTSKTLLENFIRCDQEIWTNELGFDQAQSRSYVPNLGIRDNNSVPLGRTTSIPPPLCSQCKNKAPVFGKPPKRFSYKELEEATDMFSDENFLAEGRFGVVHQGILKDGQVVAVKQLKFGGSQADLDFCREVRVLSCAQHRNVVLLIGFCIESNLRILVYEYICNGSLDLYLYGDESMPLDWNSRLKIAIGTARGLRYLHEDCRVGCIAHRDLRPKNILVTHDFEPMVADFGLARWHSEWNIDTEDRVIGTSGYLAPEYLDAGNLTYKVDVYAFGIVLLELITGRRISELEQFNGHSYLSEWFHPIRMLEPGHILQNVRSLKPCFDSKESVEFNLQLQAMARAVSLCLRVDPDARPPMSKILRVLEGGNPVRPMGLDINSVGNTSGHLSGLKSHTPPKGTINHSRRLSH* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2087 736 Gene3D Transferase(Phosphotransferase) domain 1 490 698 - -
Gso17g2087 736 SUPERFAMILY Protein kinase-like (PK-like) 395 692 IPR011009 -
Gso17g2087 736 Pfam Protein tyrosine and serine/threonine kinase 418 689 IPR001245 GO:0004672|GO:0006468
Gso17g2087 736 MobiDBLite consensus disorder prediction 205 232 - -
Gso17g2087 736 ProSiteProfiles Protein kinase domain profile. 414 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g2087 736 Gene3D HUPs 10 177 IPR014729 -
Gso17g2087 736 MobiDBLite consensus disorder prediction 709 736 - -
Gso17g2087 736 PANTHER OS01G0253100 PROTEIN 20 727 IPR045271 GO:0004714|GO:0006468
Gso17g2087 736 MobiDBLite consensus disorder prediction 212 232 - -
Gso17g2087 736 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 20 727 - -
Gso17g2087 736 Gene3D Phosphorylase Kinase; domain 1 383 489 - -
Gso17g2087 736 SMART tyrkin_6 414 692 IPR020635 GO:0004713|GO:0006468
Gso17g2087 736 MobiDBLite consensus disorder prediction 249 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2087 Gso-Chr17 40543148 40550337 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gso17g2087 PK_Tyr_Ser-Thr 3.1e-41 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0668 14 6686231 6693872 Gso17g2087 17 40543148 40550337 GST