Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2081 ATGGCGCTAACGGAGTTCTTCCACGGCGAGATCTCGTCGGAGCTATGGAAAATGCTGGTTTCAATTTCCCGAAAAGCCCTCCGCTGCAAGTCGAGCGCCGAGAGCCTCATCACCTACGTCCGCGAGCTCCTTCCTACGATCGAAGAGATCAAGTATTCCGGCGTGGAGCTGCCGGCGCCGCGCCAGTCTCAGCTCGACCGCCTCTCGGAGATCCTCCGCTCCGGCGTCGAGCTCTCGCACCAGGCCCTCTCCTCCTCCCGCTGGAACGTGTACCGCAACTTCCAGCTCGCCAAAAAAATGGAGAAGCTCGAGAAGCACGTGACAAGGTTCTTGCAGGTTCCCATGCAGGCACATATATTGGCGGACGTGAACCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGTCGAACCGGAGGATGGAGCGGTTGATTGGGGAGATGAAGATTGGAGTGAACGGGGGAGGGTGGGTGGAGGAGGCTGTGAGGAGTATGCAGGAGGATGAGACGTGGGTTGAAGGGTGTAATGGGAATAATAATAACGGTTTTGGGGTTGGGTTGGAGTTCGGGAAGAACAAGGTTTTGGAGATGATTTTTACGAGGAGTGGTGATGTTTCGGTTGTCGGTATTTGCGGGATTGGTGGGTCCGGGAAAACCACTCTTGCTAGAGAGGTCTGCAGAGATGACCAAGTGAGATGTTATTTCAAGGAGAGGATCTTGTTTTTGACTGTGTCGCAGTCCCCGAATGTGGAGCAGCTGAGAGAGAGTATCTGGGTACACATCATGGGCAACCAAGGTTTGAATGGCAATTATGCGGTTCCACAATGGATGCCACAGTTTGAGTGTAAAGTGGAAACTCAAGTACTTGTTGTTTTGGATGATGTGTGGTCACTCTCAGTGCTGGACAAGCTTGTGTTGAAAATTCCTGGCTGCAAATTCCTTGTGGTATCCAGATTTAACTTCCCAACAATTTTTAATGCCACTTATCATGTGGAATTGCTGGGTGAACATGACGCCCTTTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCTATGGGTGCTAATGTGAGTTTGGTGAAGCAGGTTGTGGCTGAGTGTGGAAGGCTTCCACTGGCTCTGAAGGTGATTGGAGCTTCTTTGCGAGACCAGAACGAAATGTTTTGGTTGAGTGTTAAAAGCAGGCTCTCCCAAGGCCAAAGCATTGGTGAAACCTATGAAACCAATCTGATTGATAGAATGGCAATTAGTACTAACTACCTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGTTCTTTTCCTGAGGATAGAAAGATTCCTCTAGAAGTTTTAATCAATATGTGGGTTGAAATCTATGACATCGATGAAGCTGAAGCATATGCCATTGTGGTTGAGCTTTCAAACAAGAATCTTCTCACCTTAGTACAAGAGGCACGTGTCGGGGGCATGTATAGCAGTTGCTTTGAGATTTCTGTCACTCAACATGATATATTGAGGGACCTTGCTCTTCATTTGAGCAACCGTGGCAGCATTCATCAACACCGAAGGCTAGTTATGGCTACACGAAAAGAAAATGGACTACTCCCCAAAGAATGGTCTAGATACGAGGACCAACCCTTTGAAGCACAGATTGTTTCAATCAACACAGGTGAAATGACCAAAATGGACTGGTTTGATCTGGATTTTCCCAAGGCTGAAGTGTTGATCATTAATTTCACATCCACTGAATACTTTTTGCCTCCCTTTATCAATAAAATGCCAAATTTGAGGGCATTGATAATAATAAACCACAGTACCTCACATGCCCGCCTTCAAAATGTTTCAGTTTTTAGGAATTTGACCAACTTGAAGAGTCTCTGGCTTGAAAAGGTTTCCATCCCTCAGTTATCAGGCACTGTCTTGCAAAACTTGGGCAAATTATTTGTAGTCCTCTGCAAGATTAATAATAGTTTGGATGGGAAACAGTTCCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGTTGATCTAACTCAATTTCCCTCAAGCATTTGTGGAATAAAGTCACTACAAAACTTGAGTCTCACCAACTGCCACAGTTTGAGTCAACTACCTGTTGAATTTGGCAAACTAAGATCACTAGAGATCCTCCGTTTATATGCTTGTCCATATCTAGAAACACTTCCTCCTAGCATGTGTGACATGAAGAGATTGAAGTATATTGATATTTCTCAATGTGTTAACCTCACATGCTTCCCTGAAGAGATTGGTAGATTAGTATGCTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCGAAGTCTGCAGTGTCATTGCAATCTCTGCAGCTTGTAATTTGTGATGAGGAGGTACAAGATATGTGGAGTGATGTTGAGATGTCCAACTCAAATGTTCTTATTCAAGTAGCAGAACAACACTATGATCTAGACTGGCTTCAAGAGTGA 2478 0.458 MALTEFFHGEISSELWKMLVSISRKALRCKSSAESLITYVRELLPTIEEIKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADVNHVRFEMAERFDRVEASNRRMERLIGEMKIGVNGGGWVEEAVRSMQEDETWVEGCNGNNNNGFGVGLEFGKNKVLEMIFTRSGDVSVVGICGIGGSGKTTLAREVCRDDQVRCYFKERILFLTVSQSPNVEQLRESIWVHIMGNQGLNGNYAVPQWMPQFECKVETQVLVVLDDVWSLSVLDKLVLKIPGCKFLVVSRFNFPTIFNATYHVELLGEHDALSLFCHHAFGQKSIPMGANVSLVKQVVAECGRLPLALKVIGASLRDQNEMFWLSVKSRLSQGQSIGETYETNLIDRMAISTNYLPEKIKECFLDLCSFPEDRKIPLEVLINMWVEIYDIDEAEAYAIVVELSNKNLLTLVQEARVGGMYSSCFEISVTQHDILRDLALHLSNRGSIHQHRRLVMATRKENGLLPKEWSRYEDQPFEAQIVSINTGEMTKMDWFDLDFPKAEVLIINFTSTEYFLPPFINKMPNLRALIIINHSTSHARLQNVSVFRNLTNLKSLWLEKVSIPQLSGTVLQNLGKLFVVLCKINNSLDGKQFPNLSELTLDHCVDLTQFPSSICGIKSLQNLSLTNCHSLSQLPVEFGKLRSLEILRLYACPYLETLPPSMCDMKRLKYIDISQCVNLTCFPEEIGRLVCLEKIDMRECPMIRYLPKSAVSLQSLQLVICDEEVQDMWSDVEMSNSNVLIQVAEQHYDLDWLQE* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2081 825 PRINTS Disease resistance protein signature 210 225 - -
Gso17g2081 825 PRINTS Disease resistance protein signature 285 299 - -
Gso17g2081 825 PRINTS Disease resistance protein signature 372 386 - -
Gso17g2081 825 PRINTS Disease resistance protein signature 733 749 - -
Gso17g2081 825 Gene3D - 337 414 IPR042197 -
Gso17g2081 825 Gene3D - 178 325 IPR027417 -
Gso17g2081 825 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 11 133 IPR008808 -
Gso17g2081 825 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 822 - -
Gso17g2081 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 437 IPR027417 -
Gso17g2081 825 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 822 IPR044974 GO:0006952
Gso17g2081 825 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Gso17g2081 825 SUPERFAMILY RNI-like 570 791 - -
Gso17g2081 825 Gene3D Ribonuclease Inhibitor 537 809 IPR032675 -
Gso17g2081 825 Pfam NB-ARC domain 195 417 IPR002182 GO:0043531
Gso17g2081 825 Gene3D - 417 508 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2081 Gso-Chr17 40453599 40457496 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0679 14 6827169 6830922 Gso17g2081 17 40453599 40457496 GST