Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2076 ATGATGCAGGGAAGCTTGAGAAATGCAAATAAAAGTGGAAAAGCTTCTAGCAGAGAAAGAAAATTGGCTTTGCAACAAGATGTGGATAGGTTGAAGAAGCAGCTTAGGCATGAAGAGAACATTCATAGAGCATTGGAGAGGGCTTTCAACAGACCCTTGGGAGCTTTGCCTCGTCTTCCGCCTTATCTCCCTCCCTATATACTAGCCCTTCTGGCTGAAGTGGCAGTTCTAGAAGAGGAAATTGTTAGGCTTGAAGAGCAGGTTGTGCATTTCAGACAGGATTTGTACCAGGAAGCTGTCTACATGTCATCTTCTATGAGGAAATTGGAAAATTCAGTTTCAGCTCCTCCAAACAAGTCAAATCCAACATTAGATAGTCCCAAGTTGGATAAATTGAAGTCTCTTACCCAAACAGCTGGTAATTCAACAGCAACATCTGAAACTAAGCCTACCACAACACTCACTGAGGATAGACAAGGGAAAGAGAATCAATCATGTACTAATTCTTCCAAGAGCAGGCAGCAATCATCCAATCAAATGAACAAAACTCCAATTAAAAACATTGACAGTAAATCATTGAAGAAAAGGTTGGATCATCCAAAAAGAAAGCAAGAACCAAGGGTGAACAACCAGCAAATTGCAGATGTAAGAAATCATAGTCCACATAAAAATTCACCAGAAGCTCAGAGTCCAAATATAATTTCAGAAAATATTCTGAAGTGCTTATCAAACATTCTCTTGAGAATGAGTGCCGTGAAGAATCCAGGTTCTACATGTGACATGGCACCCTTGTGGGATCTAAAGCCTCAAAACTGTGATGAAGAAGCAGATTTTTGGGATCCATATGGCATCTGTTTGGAATTTGGGAAGAGGCATATTGGTCCATACAAGCAATTATGTGCAATTGATGCCAAATCTTTCAATCCAAAACGAACTGCAAATACTTTATTTTTACTACATCGGTTGAAACTACTTTTTAGGAAAGTAGCCTCTGTCAACTTGGAAAACCTCAACCATCAGGAGAAGCTTGCATTCTGGATCAACATCTACAATTCGTGTATGATGAATGCATTCATAGAGAATGGCATACCAGAGAATCCTCAAATGGCTGTTGCACTAATGCGGAAGGCAACAATAAATGTTGGTGGGCACGTGCTAAGTGCAACAACCATAGAGCATTTCATTTTAAGACTTCCTTATCACTGGAAATTTACGTTTTCCAAGGGAACAAAAAATCATCAAATGACAGCAAGAAGCATATATGGACTGGAACTGTCAGAACCCCTTGTGACATTTGCTCTCTCTTCTGGAACTTGGTCCTCTCCTGCTGTGAGAGTTTACACAGCATCCCAGGTTGAGAATGAACTAGAAGTGGCCAAAAGAGAGTACTTACAGGCAGCAATTGGATTTTCAACTTCAAAGTTTGCTATCCCAAAGCTGCTGGATTGGTATTTGCTGAACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATCTGTCTCCAGTTACCAAGTGAACTGGGGAAAGAAGCCATTAAATTCCTTGAGGAAAGAAAAACCGAGCCCTTATCACAATTTGTACAAATTATGCCATATGAGTTCAGCTTTAGATACTTGATATGCACATAA 1629 0.4002 MMQGSLRNANKSGKASSRERKLALQQDVDRLKKQLRHEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSMRKLENSVSAPPNKSNPTLDSPKLDKLKSLTQTAGNSTATSETKPTTTLTEDRQGKENQSCTNSSKSRQQSSNQMNKTPIKNIDSKSLKKRLDHPKRKQEPRVNNQQIADVRNHSPHKNSPEAQSPNIISENILKCLSNILLRMSAVKNPGSTCDMAPLWDLKPQNCDEEADFWDPYGICLEFGKRHIGPYKQLCAIDAKSFNPKRTANTLFLLHRLKLLFRKVASVNLENLNHQEKLAFWINIYNSCMMNAFIENGIPENPQMAVALMRKATINVGGHVLSATTIEHFILRLPYHWKFTFSKGTKNHQMTARSIYGLELSEPLVTFALSSGTWSSPAVRVYTASQVENELEVAKREYLQAAIGFSTSKFAIPKLLDWYLLNFAKDLESLLDWICLQLPSELGKEAIKFLEERKTEPLSQFVQIMPYEFSFRYLICT* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2076 542 MobiDBLite consensus disorder prediction 111 130 - -
Gso17g2076 542 MobiDBLite consensus disorder prediction 209 231 - -
Gso17g2076 542 PANTHER EXPRESSED PROTEIN 3 541 - -
Gso17g2076 542 MobiDBLite consensus disorder prediction 136 231 - -
Gso17g2076 542 MobiDBLite consensus disorder prediction 136 187 - -
Gso17g2076 542 MobiDBLite consensus disorder prediction 1 22 - -
Gso17g2076 542 Pfam Leucine-zipper of ternary complex factor MIP1 17 98 IPR025757 -
Gso17g2076 542 Coils Coil 14 48 - -
Gso17g2076 542 Coils Coil 67 94 - -
Gso17g2076 542 PANTHER TRANSCRIPTION FACTOR 3 541 - -
Gso17g2076 542 Pfam Protein of unknown function, DUF547 335 464 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2076 Gso-Chr17 40406631 40410981 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0688 14 6940477 6944706 Gso17g2076 17 40406631 40410981 GST
Gso17g2076 17 40406631 40410981 Gso4g0322 4 2909394 2913256 PCT
Gso17g2076 17 40406631 40410981 Gso6g0307 6 2847508 2851400 PCT
Gso4g0322 4 2909394 2913256 Gso17g2076 17 40406631 40410981 PCT
Gso6g0307 6 2847508 2851400 Gso17g2076 17 40406631 40410981 PCT