Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2075 ATGAGCCCAATGTTGTCAATAAAATTGCTTTTGTGGTTCCTGTTTTTGTCATGGTGCCACTTTGCCATCCCATGCTGCGAGGCCAACCAACAAGGGGAATATCTCTATAAGTTTATTCGATCAAGGAGGGCTCAAAAACGCTCTTATGGAGAAGCTTCTTCAATGGCCACAAATCTTGGTGGTGATGGAAAATTTTCGAAGGTTTATGTTGTTAAGGAACAATCTGGGTTGATGGAAGGTGACAAAGTGAAGGCTTTGCCGGGACAACCAGCACAAGGGGTGGATTTTGATCAATATGCTGGCTATGTCACGGTGGATGCCAAGGCAGGGAGAGCACTGTTCTATTACTTTGTGGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTAAATGGAGGGCCTGGCTGCTCTTCCTTTGGGTATGGAGCCATGCAAGAACTCGGACCTTTTAGAGTCAACAGTGATGGAAGAACACTTTACACAAATCAATATGCATGGAACAATGTGGCAAACGTGATTTTCCTAGAGTCTCCAGCAGGAGTTGGTTTTTCATATTCAAACACTTCTTCTGACTACACTAAAACTGGTGACAAGAGCACAGCTATGGACTCTTACACTTTTCTTCTAAACTGGCTCGAGAGATTTCCACAGTACAAAACTCGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTTGCTGACACTATTCTCACTTATAATAAGCTTACAAATCACACAGTGATCAACCTGAAAGGGATTGCGGTTGGGAATGGCTGGATAGATGATAATATGTGTGGAAAGGGAATGTATGAATATTTCTGGACACATGCTCTGAACTCTGATGAAACCCATGAGGGAATTCAAAGGCATTGTGACTTTGAGAACGGTAACTTAACAAGTGAGTGCAGCAAATATCAAATTAGAGGGGATATTGAGATTGGAACCATTGACATATATGGCATATATGCTCCCCCTTGTGATTCAGCTGCAACAAAAGCTGGTGCCAGTCCTGCCACTAACTCTGATAGCAATTACGACCCTTGTTCTGACGATTATACCAATTCCTACTTAAATCTCGCGGAAGTACAAGAGGCTCTACATGCTAAAGCTTCAGTATGGTATCCTTGCAGTGGCGATACAGATGGGCGTGTTCCCATAACATCATCTAGGTATTCAATAAATTCCATGAAACTTCCAGTGGAGACAACATGGCGTCCATGGTATTCTAGCAATGAGGTTGGAGGATACTTGGTTGGGTACAAAGGGCTCACACTAATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTACCAACCGCAGAGAGCCCTAACCATGATCTCATTTTTCCTACGAGGAGAACTTCCTCCTGAGTTCACCTCTTAG 1413 0.4381 MSPMLSIKLLLWFLFLSWCHFAIPCCEANQQGEYLYKFIRSRRAQKRSYGEASSMATNLGGDGKFSKVYVVKEQSGLMEGDKVKALPGQPAQGVDFDQYAGYVTVDAKAGRALFYYFVESPHNASNKPLVLWLNGGPGCSSFGYGAMQELGPFRVNSDGRTLYTNQYAWNNVANVIFLESPAGVGFSYSNTSSDYTKTGDKSTAMDSYTFLLNWLERFPQYKTRDLFITGESYAGHYVPQLADTILTYNKLTNHTVINLKGIAVGNGWIDDNMCGKGMYEYFWTHALNSDETHEGIQRHCDFENGNLTSECSKYQIRGDIEIGTIDIYGIYAPPCDSAATKAGASPATNSDSNYDPCSDDYTNSYLNLAEVQEALHAKASVWYPCSGDTDGRVPITSSRYSINSMKLPVETTWRPWYSSNEVGGYLVGYKGLTLITVRGAGHMVPSYQPQRALTMISFFLRGELPPEFTS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2075 470 Pfam Serine carboxypeptidase 91 386 IPR001563 GO:0004185|GO:0006508
Gso17g2075 470 Gene3D - 388 464 - -
Gso17g2075 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 384 464 IPR001563 GO:0004185|GO:0006508
Gso17g2075 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 385 IPR001563 GO:0004185|GO:0006508
Gso17g2075 470 SUPERFAMILY alpha/beta-Hydrolases 85 463 IPR029058 -
Gso17g2075 470 ProSitePatterns Serine carboxypeptidases, serine active site. 228 235 IPR018202 GO:0004185
Gso17g2075 470 PANTHER CARBOXYPEPTIDASE 384 464 - -
Gso17g2075 470 PANTHER CARBOXYPEPTIDASE 32 385 - -
Gso17g2075 470 ProSitePatterns Serine carboxypeptidases, histidine active site. 432 449 IPR033124 GO:0004185
Gso17g2075 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Gso17g2075 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 188 IPR001563 GO:0004185|GO:0006508
Gso17g2075 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 214 239 IPR001563 GO:0004185|GO:0006508
Gso17g2075 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Gso17g2075 470 Gene3D - 357 387 - -
Gso17g2075 470 Gene3D alpha/beta hydrolase 78 337 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2075 Gso-Chr17 40376517 40391243 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0689 14 6962578 6968549 Gso17g2075 17 40376517 40391243 GST