Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2069 ATGGAAGCAACGAAAGGATTTGTATCTCCAACTTCATGCAAATGTGATGATGGACACCTAGTTACCGTGCTTAGTATTGATGGTGGCGGCATTCGGGGAATCATTCCAGGAATTATACTTGGTTTCCTCGAATCAGAACTTCAGAAGCTTGATGGTGATCATGTAAGATTGGCAGATTACTTTGATGTGATTGCGGGAACAAGTACTGGAGGATTAGTGACTGCAATGCTCACTGCTCCAGATGAAAATAACCGACCCTTGTATGCAGCCAAGGATATTAAGGATTTCTACCTTGATCATACCCCTAAAATCTTCCCACAAAATAACAATTTATTCTCACCTATCCTGAAGTTGGGCAGAACCCTGTTTGGACCACAGTACAACGGCAAGTACTTACACAAGCTTATCAGGGAGAAACTGGGAGACACAAAATTGCACCAAACATTGACCAATGTCGTCATCCCAGCATTTGACATCAAGCACCTTCAACCCGCCATCTTTTCCAGCTTCCAGCTGAAAAAGAGACCCGATTTGAATGCATCTTTGTCGGATATATGCATTTCAACTTCAGCTGCTCCAACATATCTTCCAGCTCATTCCTTTGAAACCAAGACTCACCACGGTGTCAGCAAATTCGACCTTATAGACGGTGGCGTCGCTGCAAATAATCCGGCTTTGGTAGCCATGGCGGAAGTGACGAATCGAATTAGCCATGAAGGGCAATGTAATAGCTTAAATGTGAAACCAATGCAATACGATCGATTTTTGGTGATATCGTTGGGAACAGGTTCTCAGCAAAAGGAAATGAAATACAGTGCAGATGAGGCAGCTCAATGGGGCATCTTTAGTTGGGTAACTACAACCAATGGTGGCACCCCTTTAATTGATGCCTTTAGCCATGCAAGTTCAGACATGGTTGACTTTCACATCACCTCCCTTTTCCAAGCACTCAATTCTGAACATAACTATCTCCGTATCCAGGACGATTCATTAAATGGGGACATGTCTTCGGTAGACTTGGCCACGGAGAAGAATTTGAATGATCTCGTGAAAGTTGGGGAGTCATTGTTAAAGAAACCAGTTTCAAAGATTAACTTGCAGACTGGCGTTCACGAACCTGTTAACTCTCATGAAACAAATGGAGAAGCCTTGAAGAGGTTTGCGGAACGACTATCCAAACAGAGGAGATTTCGTAAATCTCAAATGTCTGCCAATGGGAATCTTTAG 1227 0.4319 MEATKGFVSPTSCKCDDGHLVTVLSIDGGGIRGIIPGIILGFLESELQKLDGDHVRLADYFDVIAGTSTGGLVTAMLTAPDENNRPLYAAKDIKDFYLDHTPKIFPQNNNLFSPILKLGRTLFGPQYNGKYLHKLIREKLGDTKLHQTLTNVVIPAFDIKHLQPAIFSSFQLKKRPDLNASLSDICISTSAAPTYLPAHSFETKTHHGVSKFDLIDGGVAANNPALVAMAEVTNRISHEGQCNSLNVKPMQYDRFLVISLGTGSQQKEMKYSADEAAQWGIFSWVTTTNGGTPLIDAFSHASSDMVDFHITSLFQALNSEHNYLRIQDDSLNGDMSSVDLATEKNLNDLVKVGESLLKKPVSKINLQTGVHEPVNSHETNGEALKRFAERLSKQRRFRKSQMSANGNL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2069 408 PANTHER XYLOSE ISOMERASE 15 403 - -
Gso17g2069 408 SUPERFAMILY FabD/lysophospholipase-like 21 377 IPR016035 -
Gso17g2069 408 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 229 IPR002641 GO:0006629
Gso17g2069 408 Gene3D Cytosolic phospholipase A2 catalytic domain 12 404 - -
Gso17g2069 408 PANTHER PATATIN 15 403 - -
Gso17g2069 408 Pfam Patatin-like phospholipase 24 229 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2069 Gso-Chr17 40306259 40310393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2069 18 398 Miscellaneous Gene Families AT2G26560 62.924 8.94e-171 482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g2069 17 40306259 40310393 Gso4g0326 4 2956720 2960181 PCT
Gso17g2069 17 40306259 40310393 Gso6g0310 6 2896094 2899503 PCT
Gso4g0326 4 2956720 2960181 Gso17g2069 17 40306259 40310393 PCT
Gso6g0310 6 2896094 2899503 Gso17g2069 17 40306259 40310393 PCT