Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2066 ATGGACAACGACACAAACACAACACCAACCACCACCTCAGAACCACAAATAGCACACGATTTTCCCGGTCTCATCCGTGTCTTCACCGATGGTCGCGTCCAACGCTTCACCGGAACCGACGTCGTTCCACCCTCCACCACTCCCCACATTACATCCAAAGACATCACACTCCTCCACCCTCACTCCGCTACTCTCTCCGCACGCCTCTTCCTCCCAACACCACAAACCACCAGCCGCCGCAACAACAACCTCCCTCTCTTAATCTACTTCCACGGCGGCGCCTTCTGCGCCTCCTCCCCCTTCACCGCAAACTACCACAACTACGTCGCCACAATCGTCGCCGAAGCCAAAGTCGTCGCTGTCTCCGTTGACTACCGGCTAGCCCCGGAGCACCCTATTCCGGCAGCGTACGAGGATTCATGGGCTGCACTACAGTGGGTGGCGTCACACCGTAACAAAAATGGACAAGAGCCTTGGTTGAATGAGCATGCAGACTTCGGTAGGGTTTTTTTGGCTGGGGACAGTGCTGGTGCTAACATAGTGCATAACCTAACTATGCTCCTTGGTGACCCTGATTGGGACATTGGCATGGACATCCTCGGAGTGTGTCTTGTCCACCCGTATTTTTGGGGCTCAGTTCCGGTTGGATCGGAGGAGGCAGTGGACCCGGAGAGGAAGGCAGTGGTGGACCGGCTGTGGCGGTTTGTGAGTCCGGAGATGGCGGACAAGGATGACCCGCGGGTTAACCCGGTGGCAGAGGGGGCACCGAGCTTGGGGTGGCTGGGGTGTAGGAGGGTGCTGGTGTGTGTGGCGGAGAAGGATGTGCTGAGGGATAGAGGGTGGCTTTACTATAATGCTTTGAGTAGGAGTGGGTGGATGGGTGTGGTGGAAGTTGAAGAGACTCTTGGGGAGGGTCATGCGTTTCATCTCTATGATTTGGCGAGTCATAAGGCTCAGTGTTTGATCAAACGCTTGGCTCTTTTCTTCAACAGAGACCAGCCTCCTTCAATTTGA 1014 0.5572 MDNDTNTTPTTTSEPQIAHDFPGLIRVFTDGRVQRFTGTDVVPPSTTPHITSKDITLLHPHSATLSARLFLPTPQTTSRRNNNLPLLIYFHGGAFCASSPFTANYHNYVATIVAEAKVVAVSVDYRLAPEHPIPAAYEDSWAALQWVASHRNKNGQEPWLNEHADFGRVFLAGDSAGANIVHNLTMLLGDPDWDIGMDILGVCLVHPYFWGSVPVGSEEAVDPERKAVVDRLWRFVSPEMADKDDPRVNPVAEGAPSLGWLGCRRVLVCVAEKDVLRDRGWLYYNALSRSGWMGVVEVEETLGEGHAFHLYDLASHKAQCLIKRLALFFNRDQPPSI* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2066 337 SUPERFAMILY alpha/beta-Hydrolases 8 331 IPR029058 -
Gso17g2066 337 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 169 181 IPR033140 -
Gso17g2066 337 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 IPR002168 GO:0016787
Gso17g2066 337 PANTHER ARYLACETAMIDE DEACETYLASE 14 330 - -
Gso17g2066 337 Gene3D alpha/beta hydrolase 24 333 IPR029058 -
Gso17g2066 337 PANTHER CARBOXYLESTERASE 2-RELATED 14 330 - -
Gso17g2066 337 Pfam alpha/beta hydrolase fold 87 309 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2066 Gso-Chr17 40282282 40283710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2066 14 333 Carbohydrate Esterase AT3G48700 44.545 1.81e-93 280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g2066 17 40282282 40283710 Gso4g0327 4 2962997 2964222 PCT
Gso17g2066 17 40282282 40283710 Gso6g0311 6 2902891 2904227 PCT
Gso4g0327 4 2962997 2964222 Gso17g2066 17 40282282 40283710 PCT
Gso6g0311 6 2902891 2904227 Gso17g2066 17 40282282 40283710 PCT