Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2060 ATGCAAGCGGTGGGGAGGCTTGGCAGCTTCATCAGCCGCGGTGTCAACACCGTTTCAGGGACGTTCCTCCCTTTCGGTGGCGCGGTGGATATTGTTGTGGTTCAGCAGAAGGATGGGAGCTTCAAATCCTCTCCATGGTATGTAAGATTTGGGAAATACCACAAGGTTTTTAAGGAAGAGGAGAAGGAAAAGATAGAGGTTCATGTCAGTGTCAACGGTGTAGAACCTGATTTCAACATGTATTTGAACCGTAATGGGGAAGCTATTTTCCTCCATCATGCAGATACACAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAATCTACGCTTTTTGGTGGTGAAAGTGAAACTGATGATATCACATCACCGAGTGGTAGGAGGCATTTCAAGTCCAAAAGTTGGAACTTTGATTCACCAGACAAGTCAAATTCAGATGCTAAGGTTGTTGTGGGAAGGACTAAGTCTCGCCGTGCCCGAATTCTTGGGCTTGTGTCAAGGTCTTTGAGAGGGGAAGGTGGAGATGGTGATGTGAATGGGGTGGATTTGAGGGAGCGTGCCGAGATTGCAGCCAAGTTGTTGGAGCTGAAGTGGTCCACCAATCTCAATTTTGATCATAAACTACCTTGTAGGGATAGGAAGAAGACTAGGGGTGATGCCTTGGACAACGGTTTGCCTTTACCACCGCGTAAAATGAAGGAGGAAGCTCGTTCTTGCAGTGATCAAGATGGCATCAGTTCCAAGCCTGTGTTTAATGAGATGTTGTGCCCTGCAAGTGCAGGATGTGGAGATGTTCGTGTCCATGCTCAGGAGGTCTTGCATGCTGCAACTCTAATGCTACCTGAGCTAGCATCCTTGAATCTGAAGGAAGGGAGGAACACAATAACCTTCAGTTTCCCTACGGTTAAGGGGAAGCAGCAGGTTGATGCTCACATGTATTTGTGGAAATGGAACACTCGTATAGTGATATCAGATGTAGATGGGACAATTACAAGGTCAGATGTTCTAGGTCAATTCATGCCTTTAGTAGGAATCGATTGGTCACAGACAGGAGTTGCTCATTTATTCTCAGATATCAAGGGAAATGGCTACCAGCTACTTTTTCTCAGTGCTCGTGCAATATCTCAGGCCTATCATACCAGACAATTTCTATGCAACCTTAAGCAGGATGGGAAACTTTTACCAGATGGCCCTGTTGTTATATCCCCTGATGGACTCTTTCCTTCTCTATATCGAGAAGTTATCCGGAGGGCTCCTCATGAGTTCAAGATTGCATGTTTAGAGGACATTAAGGCACTTTTTCCTCCAGATTGGAATCCGTTCTATGCTGGTTTTGGAAATAGGGATACCGATGAAGTCAGTTACCTTAAGGTTGGAATCCCAAAAGGAAAAATATTCATCATTAATCCCAGGGGAGAGATTGCTGTAAACCGTCGTTGTTTTGACACAAAATCATATACTTCTCTGCATTCTCTGGTGAATGGAATGTTCCCCCCTACAAACTCATCTGAACAGGAGGATTTTAATTCATGGAATTACTGGAAGTTACCTGAGACCTCTTCTGCTACAAATATTTGA 1578 0.4474 MQAVGRLGSFISRGVNTVSGTFLPFGGAVDIVVVQQKDGSFKSSPWYVRFGKYHKVFKEEEKEKIEVHVSVNGVEPDFNMYLNRNGEAIFLHHADTQEEEEEEEEEEESTLFGGESETDDITSPSGRRHFKSKSWNFDSPDKSNSDAKVVVGRTKSRRARILGLVSRSLRGEGGDGDVNGVDLRERAEIAAKLLELKWSTNLNFDHKLPCRDRKKTRGDALDNGLPLPPRKMKEEARSCSDQDGISSKPVFNEMLCPASAGCGDVRVHAQEVLHAATLMLPELASLNLKEGRNTITFSFPTVKGKQQVDAHMYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSDIKGNGYQLLFLSARAISQAYHTRQFLCNLKQDGKLLPDGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKALFPPDWNPFYAGFGNRDTDEVSYLKVGIPKGKIFIINPRGEIAVNRRCFDTKSYTSLHSLVNGMFPPTNSSEQEDFNSWNYWKLPETSSATNI* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2060 525 PANTHER GH19076P 275 518 - -
Gso17g2060 525 PANTHER GH19076P 1 211 - -
Gso17g2060 525 Pfam lipin, N-terminal conserved region 1 103 IPR007651 -
Gso17g2060 525 SUPERFAMILY HAD-like 313 463 IPR036412 -
Gso17g2060 525 SMART lns2 321 477 IPR031315 -
Gso17g2060 525 Pfam LNS2 (Lipin/Ned1/Smp2) 281 498 IPR013209 -
Gso17g2060 525 PANTHER LIPIN 275 518 IPR026058 -
Gso17g2060 525 PANTHER LIPIN 1 211 IPR026058 -
Gso17g2060 525 MobiDBLite consensus disorder prediction 97 114 - -
Gso17g2060 525 MobiDBLite consensus disorder prediction 213 242 - -
Gso17g2060 525 MobiDBLite consensus disorder prediction 121 136 - -
Gso17g2060 525 MobiDBLite consensus disorder prediction 95 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2060 Gso-Chr17 40224968 40230591 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g2060 17 40224968 40230591 Gso4g0335 4 3019789 3028959 PCT
Gso17g2060 17 40224968 40230591 Gso6g0319 6 2961772 2970006 PCT
Gso4g0335 4 3019789 3028959 Gso17g2060 17 40224968 40230591 PCT
Gso6g0319 6 2961772 2970006 Gso17g2060 17 40224968 40230591 PCT