Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2059 ATGGATGTTTGGAGTCTTCAAAAGTTGGTGAAGACAGCACCATCTAAAGCATTGGTCATCAGAATCAACTTGGTCTGTCTTGCCATCTTTCTGGTCGTCTATGCAACCTTTCTTCTCCGTCCATCTTCATCCGTCTATTTCGAGAATGCAGCCTCCCTTGTCCGGTGCTCCTTGCGTGAGTGCCATCACAAGGGAGAAAAAAGCATAAAGATGAAAGCAGTGTTGGAGAGGAATGAAGATAGGAGGGCAAAGCAGAACGCGAGTAAGATAGAAGTGCCTAGTTTCTTTGGCGAAATGGGGAAAGGAATGAAGATAGGAATGGTGAACATGCAAGAAGATGATGTGAGTGAATGGAGCACCCTTGGAGAAACAAGCCACGTTTATTTCGAGAAAGTGTCACAGTTTTTCAATTGGACAGATTTATTTCCCGAATGGATAGATGAAGAGGAAGAGACCGATGTTCCATCGTGCCCCGAGATACCAATGCCGGAATTCACAGCATATGAAGGCATGGACGTGATCGTGGCCAAGTTGCCTTGCAATTACCCAAAGGAAGGGTGGGGAAGAAACGTTTTCAGGTTACAAGTTCATCTTATTGTGGCAAATTTGGCAGTGAAGAAGGGGAAGAGGGATTGGAATTGGAAGACGAAAGTGGTTTTGTGGAGCAAGTGTAGGCCAATGCTGGAGCTGTTTCGATGCAACGATTTGGTTAAGCAGGAAAATGAGTGGTGGTATTATGAGGTTGATGCAATGAGGTTGGAGCAGAAAGTTTCTTTGCCTGTTGGGTCCTGCAATTTGGCTCTGCCTCTATGGGAACAAGGAATCGACAAGGTGTACGACACGTGGAACCTGGAACAAAGCGTTAAAAGCGAAGCGCGAGCAAAACGTGAGGCCTATGCAACAGTGCTCCACTCCTCAGAAGGCTACGTGTGCGGCGCAATAACGCTAGCACAAACCCTGCTCCAAACCGGAACCAAGCGTGACCTAATCCTCCTCCTGGACACCTCCATCTCCGTCGCGAAACGCCGCGCCCTCGAACTCTCCGGCTGGAAGATCCGACTCATAACCCGGATCCGAAATCCGCGGGCCGAGAATGGCACCTACAACGAGTACAACTACAGCAAGTTCCGACTCTGGCAGCTCACGGATTATGAGAGAGTGATCTTCATTGATGCTGACATCATCGTCCTCCGCAACCTTGATATTCTCTTCCACTTCCCACAGATGTCCGCTACTGGTAACGACCAGTCCATCTTCAACTCCGGCATCATGGTACTCGAGCCCTCCAACTGCACATTCCACGTTCTCATGTCGCGCCGCCACGATGTCATCTCCTACAACGGTGGCGACCAGGGTTTCCTGAATGAGATCTTCATGTGGTGGCACAGGCTTCCGCGACGGGTGAACTACTTAAAGAACTTTTGGGCCAACACGACAATAGAGGCAGGTAGGAAAAATGCAATGTTCGGGGCGGAGCCGCCGAAGCTCTACGCGATTCACTATCTAGGGCTAAAGCCATGGCATTGTTATAGGGACTACGACTGCAACTGGGATGTGGAGGATCAGAGAGTGTACGCGAGCGACGTGGCACATCGACGGTGGTGGAAGGTGCACGATGCTATGGACGAGAACTTGCAAAAGCTGTGTAGGTTAACGAGGCAACGAAGAATGGAGTTGAACTGGGAAAGGAGAAAGGCTGGGAAATTAGGGTTGCCAGATATGCATTGGAAGATCAATGTCACGGATCCCAGAAGAGCTGGCTCGATGTTGATTGGTTAG 1779 0.4958 MDVWSLQKLVKTAPSKALVIRINLVCLAIFLVVYATFLLRPSSSVYFENAASLVRCSLRECHHKGEKSIKMKAVLERNEDRRAKQNASKIEVPSFFGEMGKGMKIGMVNMQEDDVSEWSTLGETSHVYFEKVSQFFNWTDLFPEWIDEEEETDVPSCPEIPMPEFTAYEGMDVIVAKLPCNYPKEGWGRNVFRLQVHLIVANLAVKKGKRDWNWKTKVVLWSKCRPMLELFRCNDLVKQENEWWYYEVDAMRLEQKVSLPVGSCNLALPLWEQGIDKVYDTWNLEQSVKSEARAKREAYATVLHSSEGYVCGAITLAQTLLQTGTKRDLILLLDTSISVAKRRALELSGWKIRLITRIRNPRAENGTYNEYNYSKFRLWQLTDYERVIFIDADIIVLRNLDILFHFPQMSATGNDQSIFNSGIMVLEPSNCTFHVLMSRRHDVISYNGGDQGFLNEIFMWWHRLPRRVNYLKNFWANTTIEAGRKNAMFGAEPPKLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKVHDAMDENLQKLCRLTRQRRMELNWERRKAGKLGLPDMHWKINVTDPRRAGSMLIG* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2059 592 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 586 - -
Gso17g2059 592 SUPERFAMILY Nucleotide-diphospho-sugar transferases 297 546 IPR029044 -
Gso17g2059 592 CDD GT8_Glycogenin 297 541 - -
Gso17g2059 592 Pfam Glycosyl transferase family 8 303 508 IPR002495 GO:0016757
Gso17g2059 592 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 295 545 IPR029044 -
Gso17g2059 592 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 586 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2059 Gso-Chr17 40171546 40176951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2059 71 592 Glycosyltransferase AT4G33330 67.608 0.0 751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0706 14 7155908 7166046 Gso17g2059 17 40171546 40176951 GST
Gso17g2059 17 40171546 40176951 Gso4g0338 4 3040726 3045927 PCT
Gso4g0338 4 3040726 3045927 Gso17g2059 17 40171546 40176951 PCT