Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2056 ATGAGCAGAGCTAAAAAATATGCTGCAATTCTTATTTTTATTTTCATTTTTTGTTTTTTAAGAAAAAAGGCTAACCTTCTGACTTTCCAAAGAACTGAGTCTAGTAATACACCAATGGATGGAATTTTCGCTTACACCATTCTCATTTTGCTTACCATATTTTCATTTATGTTCTTACCAAAACCAAACAGAAGAAGACCTCAGAACCAGACACTTGCAAAGCTCCCTCCAGGCTCAATGGGGTGGCCGTACATAGGAGAAACCCTTCAACTCTATTCCCAAGACCCAAATGCCTACTTTTCCACCAAACATAAAAGGTATGGCGAAATATTCAAGACCAACATCTTGGGTTGCCCCTGTGTGATGCTGACAAGCCCTGAGGCTGCACGCTTTGTGCTAGTGACTCAAGCTCACTTGTTCAGACCAACATACCCGAAAAGCAAGGAGCGTTTGATTGGTCCTTTTGCTCTGTTTTTCCACCAAGGTGAATACCACACACGTTTGAGGAAGCTTGTTCAGAGGTCACTGTCTCTAGAAGCACTTCGCAACTTGGTGCCTCATATTGAAGCCTTAGCCTTATCTGCCATGAACTCTTGGGGTGGTGATGGCCAAGTCATTAACACATTTAAGGAAATGAAAATGTTTTCTTTTGAAGTTGGAATCCTCACAATTTTTGGCTATCTAGAGCCGCGTTTGAGGGAGGAGCTGAAGAAGAATTACCGGATTGTGGACAATGGTTACAATTCCTTTCCAACGTGCATCCCGGGAACACAATACCAAAAGGCACTATTGGCTAGAAGGAGACTTGGCAAGATTATAGGTGACATAATTTGTGAGAGGAAGGAGAAGAAGTTGCTTGAAAGGGATCTATTGAGCTGCTTATTGAATTGGAAAGGTGAAGGGGGAGAAGTGTTATCTGATTACCAAATTGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCAGGACACCACAGCTAGTGCCATGACATGGGTTGTAAAGTACCTGCATGATGAACCCAAACTTCTGGAGTCTGTAAAGGCTGAGCAGAAGGCAATTCACAAGTCTAATGAAGGTAACCTACCACTGAGTTGGGATCAGACTAGAAACATGCGAATTACTCACAAGGTTGTGTTAGAGAGTTTGAGAATGGCAAGCATCATATCATTCCCTTTCAGAGAAGCAATAGCTGATGTGGAATACAAGGGATTCCTAATACCAAAAGGGTGGAAAGCGATGCCTCTGTTCAGAAATATTCACCACAATCCAGAATATTTTCCAGAGCCTCAGAAGTTCAACCCTTCAAGGTTTGAGGTCGCACCAAAGCCCAATACTTTCATGCCATTTGGTAGTGGAGTACATGCCTGCCCCGGCAATGAGCTTGCTAAGCTGGAGACACTGATTATGATCCATCATTTGGTCACCAAGTTTCGGTGGGAAGTGGTAGGATCCAAGTGTGGGATTCAATATGGCCCATTCCCCTTGCCACTGAATGGACTCCCAGCTAGATGTTGGAGAGAATCTACCAGCTAG 1533 0.4331 MSRAKKYAAILIFIFIFCFLRKKANLLTFQRTESSNTPMDGIFAYTILILLTIFSFMFLPKPNRRRPQNQTLAKLPPGSMGWPYIGETLQLYSQDPNAYFSTKHKRYGEIFKTNILGCPCVMLTSPEAARFVLVTQAHLFRPTYPKSKERLIGPFALFFHQGEYHTRLRKLVQRSLSLEALRNLVPHIEALALSAMNSWGGDGQVINTFKEMKMFSFEVGILTIFGYLEPRLREELKKNYRIVDNGYNSFPTCIPGTQYQKALLARRRLGKIIGDIICERKEKKLLERDLLSCLLNWKGEGGEVLSDYQIADNIIGVLFAAQDTTASAMTWVVKYLHDEPKLLESVKAEQKAIHKSNEGNLPLSWDQTRNMRITHKVVLESLRMASIISFPFREAIADVEYKGFLIPKGWKAMPLFRNIHHNPEYFPEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRWEVVGSKCGIQYGPFPLPLNGLPARCWRESTS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2056 510 Gene3D Cytochrome P450 65 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 SUPERFAMILY Cytochrome P450 73 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Gso17g2056 510 PANTHER CYTOCHROME P450 26 46 505 - -
Gso17g2056 510 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2056 510 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 46 505 - -
Gso17g2056 510 Pfam Cytochrome P450 76 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2056 Gso-Chr17 40148030 40152311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2056 47 508 Cytochrome P450 AT3G19270 66.523 0.0 645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0710 14 7196735 7201079 Gso17g2056 17 40148030 40152311 GST