Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2048 ATGGCTTTTCCTCAGCACCACTTCCAACAGCACTACCAAACCCAACAGCAACAACAGCCACAAAACAAATCCTTCAGAAATCTGCAAACAATCGATGGTCAGATGTCACAGCAGGTGGCGTTTTACAACCCTACTGATTTGCAAGATCAATCCCAACATCCACCCTACATTCCTCCATTTCATGTTGTTGGGTTTGCTCCGGGTCCTGTTCCTCCTGCTGATGGCAGTGATGGTGGAGTTGATTTGCAATTGCAATGGAATTATGGTTTGGAGCCAGAGAGGAAGAGACTAAAAGAACAGGATTTTTTGGAGAACAATTCTCAGATATCTTCTGTTGATTTCCTTCAACCACGATCAGTGTCGACTGGGTTGGGCTTGTCACTAGACAATACTCGCCTGACATCCACTGGAGACTCAGCTTTGTTGTCACTCATCGGTGATGACATCGAGCGTGAGTTGCAGCAGCAGGATGCAGAGATAGATAGATTTCTCAAAGTGCAGGGTGGACGTTTGCGGCAAGCAGTCTTGGAGAAGGTTCAGGCAACACAGCTTCAGAGTGTCTCACTAATTGAAGACAAAGTCCTTCAGAAACTTCGCGAGAAAGAAGCTATGGTAGAAAGCATCAACAAGAGGAACATTGAACTCGAAGATCAAATGGAGCAGTTGACTGTGGAAGCTGGTTCGTGGCAACAGCGAGCAAGATATAATGAAAATATGATTGCTGCTCTCAAGTTCAACCTTCAGCAAGCATATGTCCAAAGCAGAGATAGTAAAGAAGGATGTGGTGACAGTGAGGTCGACGATACAGCTTCTTGCTGCAACGGCCGTTCCCTCGATTTTCATCTGCTTTCGAGGGAGAACACCGACATGAAAGAGATGATGACATGCAAGGCTTGCAGAGTCAATGAAGTGACCATGGTTTTGTTACCTTGTAAGCATCTTTGCCTCTGTAAAGATTGTGAAAGTAAGCTTAGTTTCTGTCCTCTATGTCAATCCTCCAAATTTATCGGCATGGAGGTCTACATGTAA 1029 0.4509 MAFPQHHFQQHYQTQQQQQPQNKSFRNLQTIDGQMSQQVAFYNPTDLQDQSQHPPYIPPFHVVGFAPGPVPPADGSDGGVDLQLQWNYGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLTSTGDSALLSLIGDDIERELQQQDAEIDRFLKVQGGRLRQAVLEKVQATQLQSVSLIEDKVLQKLREKEAMVESINKRNIELEDQMEQLTVEAGSWQQRARYNENMIAALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRSLDFHLLSRENTDMKEMMTCKACRVNEVTMVLLPCKHLCLCKDCESKLSFCPLCQSSKFIGMEVYM* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2048 342 MobiDBLite consensus disorder prediction 1 24 - -
Gso17g2048 342 PIRSF SBP1_RNase_bind 1 342 IPR017066 -
Gso17g2048 342 PANTHER F2G19.2 1 342 - -
Gso17g2048 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 342 IPR013083 -
Gso17g2048 342 Coils Coil 198 232 - -
Gso17g2048 342 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 342 IPR017066 -
Gso17g2048 342 Pfam Zinc finger, C3HC4 type (RING finger) 294 332 - -
Gso17g2048 342 ProSiteProfiles Zinc finger RING-type profile. 296 331 IPR001841 -
Gso17g2048 342 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2048 Gso-Chr17 40005284 40008452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2048 296 332 Miscellaneous Gene Families AT4G39050 45.946 3.59e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0719 14 7366244 7369507 Gso17g2048 17 40005284 40008452 GST