Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2045 ATGGAAGACCACGCGCATGCTGCACTACCTCCCGGTTACCGGTTCTACCCTTCCGAAGAGGTTCTCGTCGGTTACTACTTAACCAAGAAGAACGAGAACCGGGAGGAGGGTTTCTACGGTTCTGATTTGATCAAAGAACTTGACCTCTACGATCACGATCCCTTCGAATTACCGGACGCTGCTGCTTGCTTTTCGTACGGTTACAAAGGGAGGAAGAAGCATTGGTTCTGTTACGCTAAAGAGACCAAACGCAGAAACAGAAGAAAGGTGAAAAGCGGGTTCTGGCTCCGGAAGGGAAAGGTTCGGGATATTTCCGACCACAACGGCGACGACGTCGTTTTGGGCACGAGGACGCGTTTCGTTTTCTACGTCGGCAATTCCCTGAAAAACGCTGCCAGAACCGATTGGATTTTGTACGAATACGCATTGGTTGACCGCTTTCTGGCTTCGTTTGTGCTTTGTCGTGTGGTGAATAAGCCTCCTCATAAGAATAGTCCGTCGGAGATCGGTCTGAGTTGTTGTGCTGAGGAGAGTGTTGTGGCGGTGGTGCGTCAGGTTGGTGTTCAGTGTGATGGATGTGCCGAAAGTGATGTTGTTGAAGCTAAGGTGTGTGATGAAGGCTTTGTTAATAGAGAGAATGAGATTGCTGAGAATCCAATTAGTGGTGAACATGGTGATCCAGCTGCACCTGTTTCAGTTGCTCAGGGAAGTCAGCCGGTTCAGGAAAGGCTTTCTAAACTTCCCAGTGGCAGTGCATTGTTCGTAGGAGCTATGACATCTCAGCAACTTATGCTTTCCATTCTAGAGGAGGATTTCATAGAATTGGATGATATTGCATGA 840 0.4845 MEDHAHAALPPGYRFYPSEEVLVGYYLTKKNENREEGFYGSDLIKELDLYDHDPFELPDAAACFSYGYKGRKKHWFCYAKETKRRNRRKVKSGFWLRKGKVRDISDHNGDDVVLGTRTRFVFYVGNSLKNAARTDWILYEYALVDRFLASFVLCRVVNKPPHKNSPSEIGLSCCAEESVVAVVRQVGVQCDGCAESDVVEAKVCDEGFVNRENEIAENPISGEHGDPAAPVSVAQGSQPVQERLSKLPSGSALFVGAMTSQQLMLSILEEDFIELDDIA* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2045 279 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Gso17g2045 279 Pfam No apical meristem (NAM) protein 10 143 IPR003441 GO:0003677|GO:0006355
Gso17g2045 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 278 - -
Gso17g2045 279 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Gso17g2045 279 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Gso17g2045 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 6 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2045 Gso-Chr17 39977056 39980360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2045 7 205 NAC Transcription Factor Family AT1G32510 33.333 1.01e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso17g2045 NAM 2.3e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0721 14 7384473 7388202 Gso17g2045 17 39977056 39980360 GST