Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2042 ATGAAGGTGCATCAGTTCGCACGTGGATTCTGGGAGCACGAACCCTCCCTCACACTTGGATGCAAACGCTTACGCCCCCTTGCCCCCAAGCTTTCCAACACCGACGACACCATTTCTCCACCTCATCATCATCCTGTTACAACCTTAGACCTCAAGAGCTTCATCAAACCTCAAAGTGCCTCCAGAAAACTTGGAATTGGATCCTCCTCCGATGATAATAATAATAATAATAAGAGAGACCCATCTTCACCTCATGGGCAGGTGGAAACTCATATTCCAGGAGGGACACGGTGGAATCCGACGCAAGAACAGATAGGGATATTGGAGATGCTGTATAGAGGAGGTATGCGAACTCCGAATGCTCAACAAATAGAGCAGATCACGGCACAGCTTAGCAAGTACGGCAAGATCGAAGGGAAGAACGTGTTCTACTGGTTCCAAAACCACAAAGCACGCGAGAGACAGAAGCAGAAGCGTAACAACCTAGGCCTTGCTCATAGTCTTCGTACTACTCCCACCACAATAGTGTCACACCCCTTTAGTTGTAGTGTAATAACCACTCTCGACACGACAAAACGGGGTGAAATAGTAGAAAGAGAGGAGGAAGATAGCCCGTTGAAGAAGTGTAGGAGCTGGGCATTTGAGTACTTGGAAGACCAAAGAGAGGAGGAACATAGAACTCTGGAGCTTTTCCCGTTGCACCCGGAAGGCAGACGAAGGGGTTTGTTTTAA 732 0.4809 MKVHQFARGFWEHEPSLTLGCKRLRPLAPKLSNTDDTISPPHHHPVTTLDLKSFIKPQSASRKLGIGSSSDDNNNNNKRDPSSPHGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSLRTTPTTIVSHPFSCSVITTLDTTKRGEIVEREEEDSPLKKCRSWAFEYLEDQREEEHRTLELFPLHPEGRRRGLF* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2042 243 MobiDBLite consensus disorder prediction 62 83 - -
Gso17g2042 243 CDD homeodomain 96 157 IPR001356 GO:0003677
Gso17g2042 243 ProSiteProfiles 'Homeobox' domain profile. 101 156 IPR001356 GO:0003677
Gso17g2042 243 SUPERFAMILY Homeodomain-like 95 160 IPR009057 -
Gso17g2042 243 SMART HOX_1 93 160 IPR001356 GO:0003677
Gso17g2042 243 MobiDBLite consensus disorder prediction 60 100 - -
Gso17g2042 243 Gene3D - 95 162 - -
Gso17g2042 243 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 238 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Gso17g2042 243 Pfam Homeodomain 96 155 IPR001356 GO:0003677
Gso17g2042 243 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2042 Gso-Chr17 39950777 39952566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2042 1 179 Wox Gene Family AT1G46480 59.893 4.34e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso17g2042 Homeodomain 6.2e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0724 14 7417000 7423076 Gso17g2042 17 39950777 39952566 GST