Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2039 ATGATGGCGAGACTCGCTCCCCCTTTCAGTATCTTCACACAATCCCATTACTGGCGCCCACTTCTCTCTTCTCACAACGCCAAACACGCCCTAACTGCCGCTACTAACTTCTCCATCACCTCATTAGCTCGAACGCCCAAATCACGAGATGAAGGAACAACCACCACCATTAAGCTTTCGAGCAAATCCAGAAGAAAAGCCTTCTATGAGTCCCCAGAAGGAGTCTTGTTGCGCAAGCTAAACGAGTGCTCAAAGGACGGAGATGTCATTCAAGCGCTTCGCCACTACGACGAGGCTCGAAAATTGGGGGTTCTACTCAGCCTTGATCACTACAACAAGTTGCTCTACCTGTGTTCTGTTGAAAGTGCTGCTGGTGTTCCCCATTTGGGTCTCAAAAGGGGGTTTGAGATTTTTCAGCAGATGTTGAATGACCGAGTTCAGCCCAATGAAGCCACTTTTACCAATGCTGCTAGGCTTGCTGCTGCCAAGGAAGATCCTGACATGGCTTTCGAATTGCTGAAGCAGATGAAGAATGTCGCGATTGCTCCGAAGCTGAGATCGTATGAGCCAGCTTTGTTTGGATTTTGCAAGAGGGGTGATGCCGAGAAGGCTTATCTAGTTGATGCTGACATGGTTGAGTCTGGGATTGTGGCGGAAGAGCCCGAGCTTTCTGCTCTTTTGGAAGTCAGTGTCAATGCCAATAAGGAAGACAAGGTGTATGAGGTTTTGCATCGGTTGCGTGCTACGTTGAGGCAGGTGTCTGAATCAACTTTGGGGATAGTTGAGAACTGGTTTAACTCAGAGTATGCTGCGAAAATTGGGAAGGAGAAGTGGGATGTTAAGAAGGTGAGGGAAGGGATTGCGCGGGGAGGTGGAGGATGGCATGGACAAGGGTGGCTTGGGAGTGGGCGGTGGAAGGTGGTGAATACTCAGGTGAACGAGGATGGCGTGTGTCTCTCGTGTGGGGAGAAGCTTGCGAGCATTGATATTGATCCAAAAGAGACTGAAAATTTTGCTGCCTCATTGTCTAAATTAGCTTGTCAAAAAGAAGCTAAGGCAAACTTTGTTCATTTTCAGACATGGCTTGAGCGGCATGGTCCGTTTGATGCTGTTGTAGATGGTGCCAATGTAGGCCTTGCCAATGGGCATAATTTCAGCTTTTCACAGCTTAACACTGTTGTTGAACAATTACGTCAAATAAGCCCTTCAAAGAGATTGCCTCTTATAATTTTGCATATAAGTCGGGTACATGGTGGTCCTGCTCAGAATCCAAAAAACAAGAGACTTATAGAAAATTGGAAAAAAAATGGCGTTCTTTATGCTACACCTCAAGGTTCAAATGATGACTGGTATTGGTTATATGCTGCTGTTAGTTGTAAATGCTTACTGCTAACAAATGACGAGATGAGGGACCACTTGTTCCAACTATTGGGTTCTAATTTTTTCCCGAGATGGAAGGAAAAACATCAGGTTCGAACATCAGCCTCAACTTGTGGACGCTCCCTAATTATGCCTCCCCGTTATTCAATAGTTATTCAGGAATCAGCCAGTGGTTGTTGGCATGTGCCAACTGTAACTACTGATGATCATGAGATCCCAAGGAAATGGTTGTGTGCCACAAGATCCAGAAAAGATTCATTACATAATCTATGA 1653 0.4586 MMARLAPPFSIFTQSHYWRPLLSSHNAKHALTAATNFSITSLARTPKSRDEGTTTTIKLSSKSRRKAFYESPEGVLLRKLNECSKDGDVIQALRHYDEARKLGVLLSLDHYNKLLYLCSVESAAGVPHLGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEVSVNANKEDKVYEVLHRLRATLRQVSESTLGIVENWFNSEYAAKIGKEKWDVKKVREGIARGGGGWHGQGWLGSGRWKVVNTQVNEDGVCLSCGEKLASIDIDPKETENFAASLSKLACQKEAKANFVHFQTWLERHGPFDAVVDGANVGLANGHNFSFSQLNTVVEQLRQISPSKRLPLIILHISRVHGGPAQNPKNKRLIENWKKNGVLYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQVRTSASTCGRSLIMPPRYSIVIQESASGCWHVPTVTTDDHEIPRKWLCATRSRKDSLHNL* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2039 550 Gene3D Tetratricopeptide repeat domain 72 541 IPR011990 GO:0005515
Gso17g2039 550 Pfam Pentacotripeptide-repeat region of PRORP 64 271 IPR033443 -
Gso17g2039 550 PANTHER UNCHARACTERIZED 33 545 - -
Gso17g2039 550 CDD PIN_PRORP-Zc3h12a-like 370 492 - -
Gso17g2039 550 Pfam Protein-only RNase P 312 538 IPR031595 -
Gso17g2039 550 Gene3D - 330 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2039 Gso-Chr17 39902865 39908220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2039 131 265 Glycosyltransferase AT1G05670 24.444 2.64e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0726 14 7469668 7475126 Gso17g2039 17 39902865 39908220 GST