Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2037 ATGGCCTCAGCCGTCGTGAATTTCTTGAACGCGACGTTGGATTGGGTGACGTTTGCGTCGGATGGTCCTTCTGCGCGAGCTGTAGTTTTCGGAGTCCATATCGGTGGACATTTGTTTATCGAAGTGTTTTTGCTAGTTGTCATACTTTTCTTGCTTTCACAGAAAAGTTACAAGCCTCCTAAAAGGCCTTTAACAAATAAGGAAATTGATGAGTTATGTGACGAATGGGTTCCAGAACCCCTTATTCCTTCTCTTAATAAAGAGTTGCAGTATGAACCACCAGTGCTGGAGAGTGCTGCTGGGCCACATACCATAATTAATGGCAAAGAAGTTGTCAATTTTGCTTCAGCAAACTATCTTGGGTTTATAGGTCATCCAAAGCTACTTGACTCATGTTCTTCTGCTTTAGCGAAATACGGTGTTGGTTCTTGTGGTCCCCGTGGATTTTATGGGACAATTGATGTCCACCTTGACTGTGAAGCAAGAATAGCAAAATTTTTAGGAACCCCTGAATCAATTCTGTACTCTTATGGACTTTCCACCATGTTCAGTGCAATTCCCGCTTTCTCTAAAAAAGGAGATGTAATTGTGGCGGATGAGGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTTTCTAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGGATTCTTTAAGAGAAACTTTAGAGAACATTACTGCCAAATATAAGAAGGCCAAGAATTTGAGGCGTTATATTGTTATTGAAGCTGTCTACCAGAATTCTGGGGAAATAGCACCCTTGGACGAGATCATTAAATTGAAGGAAAAATATCGCTTTCGTGTTTTGCTAGATGAGAGCAACTCATTGGGTGTGCTTGGAAGTTCTGGAAGAGGTCTCACTGAATACTGTGGAGTTCCAGTTGAGAAGATAGACATTATAACTGCTTCTATGGGACATGCATTAGCCACAGAAGGAGGATTCTGCACTGGAAGTACAAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGTTATGTCTTTTCTGCTTCTTTGCCCCCATATCTTGCAAGTGCTGCAATTACAGCTATTGATGTCCTGGAGGAAAATCCCAATCTGATAAAAAAGCTGAAGAAAAATATTGCTTTTTTAAGAAAAGGATTGTCAAAAATACCAGGCATCACAATTACAAGTAATCCAGAGTCACCTATTGTTTATTTGAGATTAGAGAAATCAAGAGGTTCCATGAAAGATGACCTGCATCTGCTTGAAAATATCGCGGAACGGGTTTTGAAAGAAGAATCTGTATTTGTGGTTGTTTCCAAAAGATCAACATTGGACAAATGCCGTTTGCCTGTGGGAATTAGATTGTTTGTTTCTGCTGGGCATTCAGAGTCTGATCTGCTCAAGGCATCTGAATCATTGAAAAAGGTTGTAGCATCAGTCCTGGGTGGTCAGAATTGA 1452 0.4084 MASAVVNFLNATLDWVTFASDGPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPEPLIPSLNKELQYEPPVLESAAGPHTIINGKEVVNFASANYLGFIGHPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPESILYSYGLSTMFSAIPAFSKKGDVIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLENITAKYKKAKNLRRYIVIEAVYQNSGEIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGRGLTEYCGVPVEKIDIITASMGHALATEGGFCTGSTRVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPNLIKKLKKNIAFLRKGLSKIPGITITSNPESPIVYLRLEKSRGSMKDDLHLLENIAERVLKEESVFVVVSKRSTLDKCRLPVGIRLFVSAGHSESDLLKASESLKKVVASVLGGQN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2037 483 Gene3D Aspartate Aminotransferase, domain 1 104 468 IPR015422 GO:0003824
Gso17g2037 483 Pfam Aminotransferase class I and II 110 471 IPR004839 GO:0009058|GO:0030170
Gso17g2037 483 Gene3D - 125 366 IPR015421 GO:0003824
Gso17g2037 483 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 3 482 - -
Gso17g2037 483 Coils Coil 225 245 - -
Gso17g2037 483 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 3 482 - -
Gso17g2037 483 SUPERFAMILY PLP-dependent transferases 81 476 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2037 Gso-Chr17 39883092 39888506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2037 1 335 Acyl Lipid Metabolism Gene Families AT4G36480 77.313 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0729 14 7496978 7503523 Gso17g2037 17 39883092 39888506 GST