Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2034 ATGAGTAGCAACATGCCTGCAAAATTGTTGCTCACAACTTTGTACATCCTCTTGGTGTTTCTTCCTATCCACATGTCACCACATGATGTTAACATAGACACACACAGTTTCAAAAGTAGTAGTAGTACTAGTGGCCACAGGAGCAAAATTGGTGGTGGTGGCTCAGCCAAAGGTTGCAACAACAACAACAGCAACAGCAACCAATTGGACACAAACACAACACCATGTCAAAAATCAACAACCATTCAAGCAGTTCCTGCAGCTTCTTCACCTCCCCTTGTATTTGCAGACCAAAGACTTGAAGTAGTGTATCCAACAGTCCAAAAATTCAAGTCCACCATCACCTCAGATCCACTAGGAGTGACCAAAACTTGGGTAGGATCAGATATATGCAGCTACAAAGGCTTCTACTGTGACACCCCACCTGACAATAGTTCTGCCACTGCTTTGGCCTCTATTGACTTAAATGGTTTCCAACTATCTGCTTCCACCCTTGATGGCTTCATTGATAATCTTCCAGATATTGCTCTTTTCCATGCAAATTCCAACAATTTTGGTGGCACAATCTCACCCCAAATAGCCAAACTCTCTTACCTCTACGAGCTTGATGTCAGCAACAACCAATTATCAGGTCCATTTCCCACTGCTGTTCTAGGCATGAGCACTTTAACATTCTTGGACTTAAGGTTCAATTTCTTCTCTGGGGCAGTTCCACCACAAATTTTCACACAAAACCTCCAAGTTCTTTTCATAAACAACAACATTTTAACTCAAGGGTTGCCTGATAACTTAGCCTCCACTCATATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCAATTCCAAGAAGTCTTCCTAAGGCTTTGTCCACTCTAAGTGAAGTGCTTTTACTAAACAACCAGTTAACTGGTTGTTTGCCTTATGAGATTGGTTTTCTTGAAGAGGCAACAGTGTTTGATGCTGGCAACAATCAGTTAACTGGTCCTTTGCCTTTATCTTTGAGTTGTCTTGAGAAGGTGGAAGTGCTCAATTTTGGTGGTAATCTATTGTACGGCATGGTGCCTGAAGTGGTGTGTGTAGGATTAGTGAATTTGGTCAACTTTTCACTATCAGATAACTATTTCACACATGTGGGACCATTTTGTAGGATGCTGATTCAGAGAGGGGTTCTTGATGTGAGGAACAATTGTATTCCTGATCTTCCTTTCCAGAGATCAGTGATGGAGTGTGCTGAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATGTGGTTTCATGGTCTCATCCCTTGTAAGCTTCCTTTTCAACATTCCATTCACAATTAG 1332 0.4189 MSSNMPAKLLLTTLYILLVFLPIHMSPHDVNIDTHSFKSSSSTSGHRSKIGGGGSAKGCNNNNSNSNQLDTNTTPCQKSTTIQAVPAASSPPLVFADQRLEVVYPTVQKFKSTITSDPLGVTKTWVGSDICSYKGFYCDTPPDNSSATALASIDLNGFQLSASTLDGFIDNLPDIALFHANSNNFGGTISPQIAKLSYLYELDVSNNQLSGPFPTAVLGMSTLTFLDLRFNFFSGAVPPQIFTQNLQVLFINNNILTQGLPDNLASTHILLLTLANNKFMGPIPRSLPKALSTLSEVLLLNNQLTGCLPYEIGFLEEATVFDAGNNQLTGPLPLSLSCLEKVEVLNFGGNLLYGMVPEVVCVGLVNLVNFSLSDNYFTHVGPFCRMLIQRGVLDVRNNCIPDLPFQRSVMECAEFFATPRMCPFMWFHGLIPCKLPFQHSIHN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2034 443 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 441 - -
Gso17g2034 443 SUPERFAMILY L domain-like 113 400 - -
Gso17g2034 443 MobiDBLite consensus disorder prediction 36 72 - -
Gso17g2034 443 Gene3D Ribonuclease Inhibitor 269 412 IPR032675 -
Gso17g2034 443 Gene3D Ribonuclease Inhibitor 106 268 IPR032675 -
Gso17g2034 443 PANTHER BNAA09G53810D PROTEIN 9 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2034 Gso-Chr17 39841292 39842926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2034 91 419 Leucine-rich Repeat extension Gene Families AT3G24480 43.161 2.23e-84 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0732 14 7542994 7544629 Gso17g2034 17 39841292 39842926 GST