Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2029 ATGGGACAATCTGTTTCCTCCGCCGCCGTCGCTAGCCGTCGCGAGAGGGACCAAGGCCACCGCTCCGTCAACTCTTCCAAGACCAGATTCACCGCCTCGGTTTCGCCGATGGCCGGTTATTCCTCCGGCGCCGCCGAAGAAGGCGAAAACCATCGCGTGGAGGCCGTTGCCGATGAATCCACCGACTACATCTCCGATCTCCCGAACGAGTGCCTGGCTTCGGTGTTTCAGTTTCTCAGCTCCGCCGATCGGAGCCGCTGTTCGCTCGTTTGCCGGCGGTGGCTCCAGATCGAAGGACAGAGCCGCCACAGGCTTTCTCTGAACGCCGAACTGGATCTGTTTCCGGCGATTCCGTCGCTGTTCTCTCGGTTCGATTCGGTGACGAAGCTCGCGCTGAAGTGCGACCGCAGATCCGTGAGCATACGCGACGACGCGCTCGTGCTGATCTCGCAGCGGTGCCCTAACCTCACGCGCCTGAAGCTTCGCGCGTGTCGCGAGCTCACCGACGCAGGAATGGAAGCGTTCGCGAAGAACTGCAAGGGATTGAAGAAGCTCTCGTGTGGATCGTGCACGTTTGGATCCAAAGGCATGAACGCGGTGCTCGACAACTGCGCCGCGCTGGAGGAGCTCTCCGTGAAGCGCCTCCGTGGAATCGCTGACACTGCAGCGGCGGAGCCGATCGGTCCCGGCGTGGCTGCGGCGTCGCTCAAAACTGTTTGCCTGAAGGAGCTATACAACGGACAGTGTTTCGGAACGCTGATTCTCGGCGCGAAGAATCTGAAAACCTTGAAGCTTTTCCGGTGCTCCGGCGATTGGGACCGGCTCTTTCAATTATTGGTGGATCGAGTCACGAAAATTGTTGAGGTTCACCTCGAAAGGCTTCAGATTAGCGACGTTGGATTGCAAGCGATAGCGAATTATTCGAGTTTGGAGATTTTGCATCTTGTTAAGACACCTGAATGTTCTGATATTGGACTTGTTGCTATTGCAGACAGGTGCAAGCTTTTGAGGAAGCTTCATATTGATGGATGGAAGGCGAATCGAATTGGGGACGAAGGTTTGATAGCTGTTGCAAAAGGTTGCCCTAATTTGCTTGAATTAGTGCTAATTGGGGTTAACCCTACTAAGGCGAGTTTGGAAATGTTGGCGTCTAATTGCCAGAATCTCGAGCGGTTGGCTTTGTGTGGAAGTGATTCGGTTGGTGATCCTGAGATATCTTGCATTGCTGCAAAGTGTGTGGCTTTGAAGAAACTGTGTATTAAGAGTTGTCCCGTTTCCGATCAAGGGATGGAGGCATTGGGGAATGGGTGTCCGAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAAGGGGTTACCCCTGAGGGTGGTGATTGGTTGAGGAGGACTAGAGGGTCAGTTGCTGTTAATTTAGATACTGGTGAGGCAGAGCTTCAGGAAGCCAGTGCTAGTGATGGAGGGGCACAGGACAATGGTGTAGAGTTCCCTCAAATGCCTGCCCAAATCGCTGCTGCATCGAGCAGCACTCGGTCTAGTTCGTCGAGGTTTGCGCTTATGTCTGCGAGGATTTCAGCGGCTGCATTGAGGAGCACTCGGTCTGGTTCGTCGAGGTTAGGGCTTTTGCCTACGAGGATTTCAGCGGCTAGCACTTTTAGGAGATGGTCTGGTGGTAGCACTAGTGCACGCCATGGTTAG 1692 0.5414 MGQSVSSAAVASRRERDQGHRSVNSSKTRFTASVSPMAGYSSGAAEEGENHRVEAVADESTDYISDLPNECLASVFQFLSSADRSRCSLVCRRWLQIEGQSRHRLSLNAELDLFPAIPSLFSRFDSVTKLALKCDRRSVSIRDDALVLISQRCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCAALEELSVKRLRGIADTAAAEPIGPGVAAASLKTVCLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLLVDRVTKIVEVHLERLQISDVGLQAIANYSSLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDEGLIAVAKGCPNLLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALGNGCPNLVKVKVKKCKGVTPEGGDWLRRTRGSVAVNLDTGEAELQEASASDGGAQDNGVEFPQMPAQIAAASSSTRSSSSRFALMSARISAAALRSTRSGSSRLGLLPTRISAASTFRRWSGGSTSARHG* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2029 563 SUPERFAMILY F-box domain 58 97 IPR036047 GO:0005515
Gso17g2029 563 PANTHER F-BOX PROTEIN SKIP2 46 475 - -
Gso17g2029 563 SMART LRR_CC_2 179 203 IPR006553 -
Gso17g2029 563 SMART LRR_CC_2 386 411 IPR006553 -
Gso17g2029 563 SMART LRR_CC_2 412 436 IPR006553 -
Gso17g2029 563 SMART LRR_CC_2 283 307 IPR006553 -
Gso17g2029 563 SMART LRR_CC_2 153 178 IPR006553 -
Gso17g2029 563 SMART LRR_CC_2 333 360 IPR006553 -
Gso17g2029 563 SMART LRR_CC_2 308 332 IPR006553 -
Gso17g2029 563 Pfam Leucine Rich repeat 153 176 IPR001611 GO:0005515
Gso17g2029 563 MobiDBLite consensus disorder prediction 24 38 - -
Gso17g2029 563 SUPERFAMILY RNI-like 114 469 - -
Gso17g2029 563 Gene3D - 63 97 - -
Gso17g2029 563 MobiDBLite consensus disorder prediction 1 51 - -
Gso17g2029 563 Gene3D Ribonuclease Inhibitor 98 489 IPR032675 -
Gso17g2029 563 SMART fbox_2 67 107 IPR001810 GO:0005515
Gso17g2029 563 ProSiteProfiles F-box domain profile. 61 97 IPR001810 GO:0005515
Gso17g2029 563 Pfam F-box-like 64 97 IPR001810 GO:0005515
Gso17g2029 563 PANTHER UNCHARACTERIZED 46 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2029 Gso-Chr17 39779447 39781687 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0738 14 7632480 7634642 Gso17g2029 17 39779447 39781687 GST