Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2027 ATGCCACTACACCATCACCTCTTCTTAGAAGAAACTAAAATGGCACATCGTTACCCAAAACCCCTTCTAGACACCCTCTACTGCTTAGAAGATCACATTCATTGGGAGGAAGAAGAACAACAAGTAGACTATAATGAGTACAGTAACACAACAACCACAAACACTAATTCCTCCAATGTGGTCTTGTTAGAACACGACCTCTTCTGGGACCACGAGGAGCTACCTTCTCTTCTCGCCAAAGAACACCAAAACCAACTCTCGAATACTCTTCTCCAAAACAACCTCGTTTTAGCCTCATCTCGAGAAGAAGCAGTGGAGTGGATTCTGAAAGTAAATGCTCGTTATTCCTTTTCTACCCTCACTGCGGTTCTCGCTGTTAACTACCTCGATAGGTTCCTCTTCAGCTTCAGATTCCAAAACGACAACAACGACAACAACAACAACAACAATCCTTGGCTCACACAACTATCCGCAGTGGCTTGCCTCTCTCTCGCTGCCAAATTTGAAGAGACCCACGTGCCCCTTTTTATAGACCTCCAAGTGGAGGAGAGTAAGTACTTGTTTGAAGCGAAAACCGTTAAGAGAATGGAAATCTTGGTTCTTTCCACACTTGGGTGGAAGATGAACCCTGTAACACCTCTTTCATTTCTTGATTACATCACAAGGAAACTGGGGTTAAAGGGCTATCTCTGTTGGGAGTTTCTCAGAAGGTGTGAAACCGTTCTTCTCTCTGTCTTTGCAGATTCTAGATTTATGGGTTATCTACCATCTGTGTTGGCTACTGCCACAGTGATGCGCGTGGTCAATACAGTGGAGCCTCGTCTAGGAGTGGAATACCAAGATCAGCTCTTGGGTATTCTTGGAATCGACAAGGAGAAGGTGGAAGAATGCTACAATCTGATGATGGAGGTTGTGTCAGGGTACGATGAGGAAGGAAAACGAACCAAGTTGAAGAAACGCAAGTTAGAGTCGATTATTCCTTGTAGTAGCCAAAACGGCGTAATGGAAGGGTCGTTTAGCTGTGATAGTAGTTCGAATGAGTCTTGGGAGTTAGGTGCATCTTCTGTTTCATCCTCCAGCAAGAAGACTAGAACTCAAGATCAGCTTCTATTGAACCATTCAAACTCATCAGATTTTATAAGCATTCCTCGCTAG 1155 0.4407 MPLHHHLFLEETKMAHRYPKPLLDTLYCLEDHIHWEEEEQQVDYNEYSNTTTTNTNSSNVVLLEHDLFWDHEELPSLLAKEHQNQLSNTLLQNNLVLASSREEAVEWILKVNARYSFSTLTAVLAVNYLDRFLFSFRFQNDNNDNNNNNNPWLTQLSAVACLSLAAKFEETHVPLFIDLQVEESKYLFEAKTVKRMEILVLSTLGWKMNPVTPLSFLDYITRKLGLKGYLCWEFLRRCETVLLSVFADSRFMGYLPSVLATATVMRVVNTVEPRLGVEYQDQLLGILGIDKEKVEECYNLMMEVVSGYDEEGKRTKLKKRKLESIIPCSSQNGVMEGSFSCDSSSNESWELGASSVSSSSKKTRTQDQLLLNHSNSSDFISIPR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2027 384 Pfam Cyclin, C-terminal domain 211 312 IPR004367 -
Gso17g2027 384 Gene3D - 76 299 - -
Gso17g2027 384 SUPERFAMILY Cyclin-like 68 209 IPR036915 -
Gso17g2027 384 SMART cyclin_7 106 202 IPR013763 -
Gso17g2027 384 Gene3D - 87 209 - -
Gso17g2027 384 PANTHER CYCLINS 47 362 IPR039361 -
Gso17g2027 384 SUPERFAMILY Cyclin-like 212 311 IPR036915 -
Gso17g2027 384 SMART Cyclin_C_2 211 343 IPR004367 -
Gso17g2027 384 PANTHER CYCLIN D3.1 PROTEIN 47 362 - -
Gso17g2027 384 CDD CYCLIN 100 201 IPR013763 -
Gso17g2027 384 Pfam Cyclin, N-terminal domain 79 209 IPR006671 -
Gso17g2027 384 ProSitePatterns Cyclins signature. 101 132 IPR006671 -
Gso17g2027 384 MobiDBLite consensus disorder prediction 342 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2027 Gso-Chr17 39742674 39744863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2027 22 321 Core Cell Cycle Gene Families AT4G34160 49.505 2.42e-94 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0740 14 7676417 7678744 Gso17g2027 17 39742674 39744863 GST
Gso17g2027 17 39742674 39744863 Gso4g0366 4 3341155 3342632 PCT
Gso17g2027 17 39742674 39744863 Gso6g0346 6 3257612 3259735 PCT
Gso4g0366 4 3341155 3342632 Gso17g2027 17 39742674 39744863 PCT
Gso6g0346 6 3257612 3259735 Gso17g2027 17 39742674 39744863 PCT