Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2025 ATGGGAGGTTGGGCTATCGCGGTGCATGGTGGCGCTGGTGTGGACCCTAATCTTCCACTCGAGCGTCAAGAAGAAGCGAAACAACTTCTCACGCACTGTCTCAATCTTGGAATCTCTGCTCTAAATTCTAATCTTCCCGCCATAGATGTCGTTGAACTTGTGGTGAGGGAATTGGAAACGGATCCGCTGTTCAATTCGGGCCGTGGATCTGCCCTGACAGAAAAAGGAACGGTGGAGATGGAGGCTAGCATCATGGATGGTCCAAAACGACGATGCGGCGCCGTTTCGGGTCTTACCACCGTTAAGAACCCGATCTCGCTCGCTCGTTTGGTTATGGACAAATCCCCACATTCCTATCTCGCCTTCTCCGGAGCCGAAGAATTTGCTAGGCAACAGGGTGTGGAGGTTGTGGACAACGAGTACTTTATCACACCTGATAATGTTGGCATGCTCAAGCTGGCCAAGGAAGCAAACACAATCCTGTTTGATTACCGAATCCCAACATCGGGGTACGAGACGTGCGGATCCAATGTGGAGAGTCCACTGCAAATGAATGGACTCCCAATAAGCGTGTACGCGCCCGAAACCGTTGGATGCGTGGTGGTCGACCGGGAGGGCCGGTGCGCGGCAGCGACATCCACAGGGGGGCTGATGAACAAAATGACCGGTCGCATCGGTGACTCGCCGCTGATAGGCGCTGGGACCTACGCGTGCGACGTGTGCGGTGTATCGTGCACGGGCGAGGGCGAGGCCATCATACGTGGCACGCTGGCGCGTGAGGTGGCAGCGGTGATGGAATACAAAGGGTTGAAGCTTCAAGAAGCTGTGGATTTTGTTATCAAGCACCGTCTCGATGAAGGGATGGCTGGTCTCATTGCTGTGTCAAATGCTGGGGAAGTGGCTTATGGGTTCAATTGCAATGGCATGTTTAGGGGCTGTGCCACTGAAAATGGCTTCATGGAGGTTGGAATCTGGGAATAG 981 0.5403 MGGWAIAVHGGAGVDPNLPLERQEEAKQLLTHCLNLGISALNSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEEFARQQGVEVVDNEYFITPDNVGMLKLAKEANTILFDYRIPTSGYETCGSNVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACDVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLKLQEAVDFVIKHRLDEGMAGLIAVSNAGEVAYGFNCNGMFRGCATENGFMEVGIWE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2025 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Gso17g2025 326 CDD Asparaginase_2 5 318 - -
Gso17g2025 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Gso17g2025 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Gso17g2025 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Gso17g2025 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2025 Gso-Chr17 39711760 39713677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2025 6 260 Miscellaneous Gene Families AT4G00590 28.623 3.55e-18 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0741 14 7712165 7715024 Gso17g2025 17 39711760 39713677 GST
Gso17g2025 17 39711760 39713677 Gso4g0367 4 3359748 3361521 PCT
Gso17g2025 17 39711760 39713677 Gso6g0347 6 3279384 3281014 PCT
Gso4g0367 4 3359748 3361521 Gso17g2025 17 39711760 39713677 PCT
Gso6g0347 6 3279384 3281014 Gso17g2025 17 39711760 39713677 PCT