Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2017 ATGGCTTCGAGTTTTGACCGGTGGGAAAAGGATCCTTTCTTTAACGCTGCCGAAGAAGTTCAGGAATCTGCAGACAGGATGGAATCTACATATAGGACATGGTTACATGCAACAAAAGATGCATCCAGCATGTGGAACTCTGATGAATTGTGCAGAGATCTACGCACTGCACTTAGCACTGCCAAATGGCAGTTAGAGGAATTTGCACGGGCGGTGAGGTCAAGTTATGTCAAAAGCTCAAGTGAGGAAGCGAGAAATAGGCACCGAGATTTTATCACTGCAATTGAGGATAATATAATGAAAGTTGAGCATTCGTTGAGTGAATCAGTTGTTCCTGGAGGCAAGGCGTCTCTGCCTTGGTTGCGTTTAGATGAAGGAGAACAGGATGAACTTGCTTTGTTTCTTTCAGGAATGCCAGCAGCTAACAACAGGAACATTGAAGATCCACGGTTAAGTGAAAACGTTTCAGCCAGTGATTGTTTGAAGGATTTTCATGTTTCATCTGTGTGGGGCGACTCAAAGGAGGATATATCACATGGGCATCGTCGGGCAGCCAGTGCTAGTGCTGATATTGGTTTTTATAAAATTTCAGTTCATGATGATGCACAGCAGTGGAGTTCCTCAAGTGGTTCTTCTGGTCCAATGCACAAGGTACCAAGTTTATCAGGATTTCTTAGATCCATGGAATCCGTCTCTAAGTTGAAGTGGCCTAGGAATGGTTATAGAAAGCTGAAAGCAGCGGATCATCATAAAGAAACTGATGGTGAACTACTTCCAACAGCTGGATTGAATAGGGGCAACAATGCACGCTGTGAAAGAAGTAAGAGTGGCCTTGATAGTTGTGATGAATCCTATGACAAGCAACTATATGGATGGCATGGTGCTATTTGGAGACAGCTTCAAAGATCTCAATACCAAATGCAATACAGTCAGTCTGTTCGAATAGTTGTTTGGATTGTTGTTCTCCTTTGTTTCATTGCTTTAATTGCATTCCATGCAATGTAG 1005 0.4289 MASSFDRWEKDPFFNAAEEVQESADRMESTYRTWLHATKDASSMWNSDELCRDLRTALSTAKWQLEEFARAVRSSYVKSSSEEARNRHRDFITAIEDNIMKVEHSLSESVVPGGKASLPWLRLDEGEQDELALFLSGMPAANNRNIEDPRLSENVSASDCLKDFHVSSVWGDSKEDISHGHRRAASASADIGFYKISVHDDAQQWSSSSGSSGPMHKVPSLSGFLRSMESVSKLKWPRNGYRKLKAADHHKETDGELLPTAGLNRGNNARCERSKSGLDSCDESYDKQLYGWHGAIWRQLQRSQYQMQYSQSVRIVVWIVVLLCFIALIAFHAM* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2017 334 Gene3D - 9 110 - -
Gso17g2017 334 PANTHER EXPRESSED PROTEIN 1 333 - -
Gso17g2017 334 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Gso17g2017 334 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Gso17g2017 334 PANTHER OS05G0443700 PROTEIN 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2017 Gso-Chr17 39564043 39567240 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0749 14 7829160 7831432 Gso17g2017 17 39564043 39567240 GST
Gso17g2017 17 39564043 39567240 Gso4g0385 4 3522581 3525606 PCT
Gso17g2017 17 39564043 39567240 Gso6g0362 6 3400669 3403543 PCT
Gso4g0385 4 3522581 3525606 Gso17g2017 17 39564043 39567240 PCT
Gso6g0362 6 3400669 3403543 Gso17g2017 17 39564043 39567240 PCT