Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2016 ATGAAGAAAGCAGCGATTTTGAAGTCTCTCCAAACCATTATGGTTGTCTTCCTGCTGATAGTACTCTTTAGCAGCAACACCAAAGCAGAAAAAGAAACAATCCACGACCATGCAAACAAAAAGACCTACATAATCCACATGGACGAGACCACCATGCCCTTAACCTTCACCGACCACCTCAGCTGGTTCGACGCCTCCCTCAAATCAGCGTCCCCCTCCGCGGAGATTCTCTACACTTACAAACACGTGGCCCATGGCTTCTCCGCCAGACTCACTCCCAAGGACGTAGACACACTTGCAAAACAACCCGGCATCCTCTCCGTCATCCCCGAACTCAAATACAAACTCCACACCACAAGAACTCCCAACTTCCTTGGACTTGACAAAGCCACCACCTTGTTACCCGCCTCGGAGCAACAGAGCCAGGTGGTCATTGGACTCCTCGACACCGGCGTCTGGCCCGAGCTCAAAAGCCTCGACGACACGGGCCTCGGCCCGGTCCCTTCCACCTGGAAAGGCCAGTGCGAAATTGGAAACAACATGAACTCTTCCAACTGTAACAGAAAACTTGTCGGAGCGAGGTTTTTCTCCAAAGGCTACGAAGCCGCACTTGGACCCATTGACACAACTACAGAGTCAAAGTCAGCGCGTGACGATGACGGGCATGGGAGTCATACTTTAACCACCGCGGCAGGCTCGGTTGTACCCGAAGCTAGCCTCTTCGGCTTGGCGTCGGGTACGGCGCGTGGAATGGCCACGCAAGCGCGTGTGGCGGTTTACAAAGTGTGCTGGCTCGGCGGGTGTTTTACTTCCGACATAGCCGCGGGAATCGACAAGGCCATAGAAGACGGCGTGAATGTTCTGTCCATGTCCATTGGGGGAAGCTTGATGGAGTATTACAGGGATATAATAGCGATTGGATCCTTCACTGCCATGTCACACGGGATTCTGGTGTCCACGTCAGCGGGGAACGGTGGGCCCAGTCAGGGAAGTTTGTCCAACGTGGCACCGTGGATAACAACTGTGGGAGCGGGAACTATCGACCGCGATTTCCCTGCTTACATAACCCTCGGAACAGGGAAAACATACACCGGAGCTTCTCTTTATAGCGGTAAACCCTTGTCGGATTCGCCGCTTCCTCTTGTTTACGCTGGGAACGCGAGTAACTCTTCTGTAGGGTATCTATGTTTGCAAGATTCTCTGATTCCTGAGAAAGTTTCAGGGAAAATTGTTATATGTGAGAGAGGTGGGAATCCGAGAGTGGAAAAGGGTTTGGTGGTTAAGCTTGCTGGAGGTGCTGGAATGATATTGGCGAATAGTGAAGCCTACGGAGAAGAGTTAGTTGCTGACTCTCATCTTCTTCCTGCTGCGTCTTTGGGACAAAAATCAAGCGAGATTTTGAAGAACTATGTTTCATCTTCACCTAATCCAACAGCTAAGATTGCTTTCTTAGGGACCCATTTGCAGGTTCAACCTTCTCCTGTTGTAGCGGCTTTTAGCTCCAGAGGACCAAATGCACTCACCCCAAAGATTCTCAAACCGGATCTAATAGCACCAGGAGTCAACATTTTAGCCGGTTGGACCGGTGCGGTTGGACCAACTGGGTTGACTGTTGACACCCGCCATGTCAGCTTCAACATAATTTCTGGAACATCCATGTCATGCCCTCATGTAAGTGGCTTAGCCGCAATTCTCAAAGGAGCACACCCTCAGTGGAGCCCTGCCGCCATCAGGTCCGCACTCATGACAACAGCGTACACGAGTTATAAAAACGGTGAAACGATTCAAGATATTTCAACAGGACAACCTGGGACGCCGTTTGATTACGGTGCCGGACACGTCGATCCCGTGGCCGCTCTTGATCCTGGTCTCGTCTACGATGCCAACGTGGACGATTACTTAGGGTTTTTCTGCGCACTAAACTACTCGTCATTTCAAATCAAGCTTGCTGCGAGGAGGGACTATACGTGTGACCCGAAGAAGGATTACAGAGTGGAGGATTTTAATTATCCTTCTTTTGCGGTTCCTATGGATACAGCTTCGGGGATTGGGGGAGGTTCCGATACTCTGAAGACCGTGAAGTACTCTAGGGTTTTGACTAACGTGGGAGCTCCGGGAACGTACAAAGCTTCGGTGATGTCGTTGGGGGATTCGAATGTGAAGACTGTGGTGGAACCGAATACGTTGAGTTTCACGGAATTGTACGAGAAGAAGGACTATACGGTGTCGTTTACATACACTTCGATGCCGTCTGGGACGACCAGCTTCGCACGTTTGGAATGGACGGATGGGAAGCATAAGGTTGGTAGTCCAATTGCGTTCAGCTGGACATGA 2334 0.5086 MKKAAILKSLQTIMVVFLLIVLFSSNTKAEKETIHDHANKKTYIIHMDETTMPLTFTDHLSWFDASLKSASPSAEILYTYKHVAHGFSARLTPKDVDTLAKQPGILSVIPELKYKLHTTRTPNFLGLDKATTLLPASEQQSQVVIGLLDTGVWPELKSLDDTGLGPVPSTWKGQCEIGNNMNSSNCNRKLVGARFFSKGYEAALGPIDTTTESKSARDDDGHGSHTLTTAAGSVVPEASLFGLASGTARGMATQARVAVYKVCWLGGCFTSDIAAGIDKAIEDGVNVLSMSIGGSLMEYYRDIIAIGSFTAMSHGILVSTSAGNGGPSQGSLSNVAPWITTVGAGTIDRDFPAYITLGTGKTYTGASLYSGKPLSDSPLPLVYAGNASNSSVGYLCLQDSLIPEKVSGKIVICERGGNPRVEKGLVVKLAGGAGMILANSEAYGEELVADSHLLPAASLGQKSSEILKNYVSSSPNPTAKIAFLGTHLQVQPSPVVAAFSSRGPNALTPKILKPDLIAPGVNILAGWTGAVGPTGLTVDTRHVSFNIISGTSMSCPHVSGLAAILKGAHPQWSPAAIRSALMTTAYTSYKNGETIQDISTGQPGTPFDYGAGHVDPVAALDPGLVYDANVDDYLGFFCALNYSSFQIKLAARRDYTCDPKKDYRVEDFNYPSFAVPMDTASGIGGGSDTLKTVKYSRVLTNVGAPGTYKASVMSLGDSNVKTVVEPNTLSFTELYEKKDYTVSFTYTSMPSGTTSFARLEWTDGKHKVGSPIAFSWT* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2016 777 SUPERFAMILY PA domain 373 442 IPR046450 -
Gso17g2016 777 ProSiteProfiles Serine proteases, subtilase domain profile. 113 620 - -
Gso17g2016 777 Gene3D - 637 776 - -
Gso17g2016 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Gso17g2016 777 Gene3D - 348 489 - -
Gso17g2016 777 SUPERFAMILY Subtilisin-like 116 624 IPR036852 GO:0004252|GO:0006508
Gso17g2016 777 Gene3D Peptidase S8/S53 domain 143 633 IPR036852 GO:0004252|GO:0006508
Gso17g2016 777 CDD PA_subtilisin_like 354 481 - -
Gso17g2016 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 775 IPR045051 -
Gso17g2016 777 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Gso17g2016 777 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Gso17g2016 777 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Gso17g2016 777 Pfam Fibronectin type-III domain 667 773 IPR041469 -
Gso17g2016 777 Pfam PA domain 380 465 IPR003137 -
Gso17g2016 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Gso17g2016 777 Pfam Peptidase inhibitor I9 42 117 IPR010259 -
Gso17g2016 777 Pfam Subtilase family 141 612 IPR000209 GO:0006508|GO:0008236
Gso17g2016 777 CDD Peptidases_S8_3 114 586 IPR034197 -
Gso17g2016 777 MobiDBLite consensus disorder prediction 209 228 - -
Gso17g2016 777 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2016 Gso-Chr17 39545244 39547930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2016 38 777 Subtilisin-like Serine Gene Family AT5G67360 64.151 0.0 988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0750 14 7834109 7836959 Gso17g2016 17 39545244 39547930 GST
Gso17g2016 17 39545244 39547930 Gso4g0387 4 3529895 3532889 PCT
Gso17g2016 17 39545244 39547930 Gso6g0364 6 3410480 3413236 PCT
Gso4g0387 4 3529895 3532889 Gso17g2016 17 39545244 39547930 PCT
Gso6g0364 6 3410480 3413236 Gso17g2016 17 39545244 39547930 PCT