Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2015 ATGGAGCTTCTAATGGTGGTGGATGATTTTTTTGTCACGGCGTCCCTGGCGCTTCTTCTTACCTTCATCGTCTTAAAGCTCGTCGAGGCCATGAACGACACTCACGCCGCACCAAAACGTCACGTCGTCCACCTCGAACCGGATCATCCGGTTTCTCGAGCCAAGACCAAGGTCGGTCTCATTAGTCCGGTTCAGGAGGAAATTGCCACGTGTGCAGTAGGAGCCAAACACGGGATAGAAAAAAAGGCTGCCGTCAAATCGGTTCGTCCTCGTGGGAAACGGTTCACCGTTAACCCCGCTCAAAGCAAGGTTAAGGTCGAACCGGTTCCTCCCGCTCAAAGCGAGAGCACGATCGGTTTTGTTAGTCCGGTTCAATCTGCCATGTGTGTGGAGACTGAACGCAAGGTAGAAGAAGCTATGGTCGAACCGGAACTGGTTCAGCTCGTTAAGACCGAGGGCACGGTTGGTTTTATTAGTCCGATTCAAGCTGACACCTGTGTAGGAACAGAAGACAAGAAAGAAGAAGCTACGGTCGAATTCGATTCCCACGTTGTTGTGGAGTCACCGGTGAAATCAGACACAGACATTGTCGTTACAGAGGAAATAGCTGAGGGCAATGAAGGAACACAAGAATTGGATGATTCGGCGGAGAAGAGGATCGTGGAAAGTGTTGAAGAAATCAACGTGGAACCTTCTGTTGTAGATAGCGACGGAAAAGAGAATGAAGATGATTATGATGATGATTGGGAAGGGATTGAAAGGAGTGAATTGGAGAAAGAATTTATGGCGGCTACGGAATTTGTTAGTGGCGAGGAAAATCGATTGGGGGGTGTAGGAAGCAATTTGAGAATGGAGTTGTATGGGCTTTACAAGGTTGCCACGGAAGGGCTTTGCCGTGAACCTCAACCAATGGCTCTCAAGCTCGCCGCACGTGCCAAGTGGAATGCTTGGCAAAAGCTGGGGAACATGAATCCAGAGGTTGCAATGGAGCAGTATATCAGCCTTCTTTCGGATAAATTTCCCGGATGGATCAAAGATACTTCTGCTGGAATGAGTGAACATGAAACCACAAGGCCTGAAGTTTCTGGGTCCGATGCTTCTGATTTGAGCACAACTTTGTCTCATCAACAAATGATCATAACTGAAAGGGAGCTTGAACAAGAGTCTGATTCCAAGGACCGTAGCCCACTTACAGAGACAGATTTGCAGAACAATGTTAACAAATGA 1227 0.48 MELLMVVDDFFVTASLALLLTFIVLKLVEAMNDTHAAPKRHVVHLEPDHPVSRAKTKVGLISPVQEEIATCAVGAKHGIEKKAAVKSVRPRGKRFTVNPAQSKVKVEPVPPAQSESTIGFVSPVQSAMCVETERKVEEAMVEPELVQLVKTEGTVGFISPIQADTCVGTEDKKEEATVEFDSHVVVESPVKSDTDIVVTEEIAEGNEGTQELDDSAEKRIVESVEEINVEPSVVDSDGKENEDDYDDDWEGIERSELEKEFMAATEFVSGEENRLGGVGSNLRMELYGLYKVATEGLCREPQPMALKLAARAKWNAWQKLGNMNPEVAMEQYISLLSDKFPGWIKDTSAGMSEHETTRPEVSGSDASDLSTTLSHQQMIITERELEQESDSKDRSPLTETDLQNNVNK* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2015 408 PRINTS Acyl-coA-binding protein signature 278 296 IPR000582 GO:0000062
Gso17g2015 408 PRINTS Acyl-coA-binding protein signature 301 316 IPR000582 GO:0000062
Gso17g2015 408 PRINTS Acyl-coA-binding protein signature 322 339 IPR000582 GO:0000062
Gso17g2015 408 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 257 345 IPR000582 GO:0000062
Gso17g2015 408 SUPERFAMILY Acyl-CoA binding protein 256 343 IPR035984 GO:0000062
Gso17g2015 408 Gene3D - 251 360 IPR014352 -
Gso17g2015 408 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 3 126 397 - -
Gso17g2015 408 MobiDBLite consensus disorder prediction 381 397 - -
Gso17g2015 408 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 126 397 - -
Gso17g2015 408 MobiDBLite consensus disorder prediction 354 380 - -
Gso17g2015 408 MobiDBLite consensus disorder prediction 350 408 - -
Gso17g2015 408 Pfam Acyl CoA binding protein 258 336 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2015 Gso-Chr17 39530721 39534642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2015 168 372 Acyl Lipid Metabolism Gene Families AT4G24230 45.495 1.56e-41 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0751 14 7848142 7852367 Gso17g2015 17 39530721 39534642 GST