Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2014 ATGATTTTAGCGCGTAACTTTGGAATGCGTAGTCAATATCATAAGTTCATAACCATGAAACTCAATAGCATCGTTGTTCTTTCTCGGAGCAACAGAGATAACGAGTGCGGTGAAGTTGCTATGGACCCGTCTATCATGAAGCTTCTAGAAGATGACGAGGATGAAGCAATGCATTCAGGGGTGGATGTGGAAGCCTTCCAGGCTGCCCTAAATAGAGATATAGGAGGAGATGTGTCTACTTCACAATTTTCTGGCTCAGATGCAGTGTTGTCTCAAGGAAGCAATAATACATCAAGTCAATCTTTATCACAGTGGCCTACTTCTAACCATGACAGCCAAACTGACTGTCAAAAGCAAGAATCTAAAACTGCACAACAGCAAGATCAACCTTCATCTGGGGTGGAGCTGAAGCAACATGGATCTCTTGCGGAACAACTACATCATGTTACTTCTCAGGACATAAATAATCCTCATTTATCACAGAAACAATCTCAAGATGAATGTCACCAAGCACCAGCTTTACAAGTTTCCCTCCACAATTCTCAAGCTATTGGAATTCAGAATTCTGGAAAAGATCCAGTTCTTAATAATGAGGTAGTAAAGAATCATAACCCCAGCAGTGAATCTCAGTATGCAAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCAAGTAGTCAAGGAAATCGTAGTACTAGTAAGCAAGTACCATTTGGCATGTTGCTACCCATCTTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACTTTATTTGCTAAATTGAAGAAAGAGGAAATACCGAAAGACAGTTTTGTGCGGCTCATGAAAGGTATCGTAGGGGATCAGATGCTTAGATTAGCATTAGCAAAGGTGCAAGTGCAACCACAGACAAGGCCCAATCAAGCATCTGCTGGGCAGCAGCACCCTATGAGGATGCCAACTGTTGGTTCAGGTGCAAGCCAATTGAATGATCCCCATGCTTTAGCAGAGATGCATCAGAGAAGTATGAATGCTGCCGTTGACCAATCTCGCATGGGTTCTTCAGCTGGCCAAGCTATGGAGAGCAATGCTAGAAAATCTCAGGAACTAGATGTTAAAATAGAATCTCAAGGATTGCAACCAAGCCAATTGACATCTTCCAGTTCCAACAAAATTGCTCAAGAAACAGAAAGAACATCAGTTCACATACAAGGGCTTAATAAGCAGCAGCAACAACATCTACATTTCCCATCAGCATATGGAAATAGTGGTGGTAACTATAACCCTTTTTCTGGGACAACCAGTAGTTCCACTTCATCTATCAAATCACAATCGCATGATTCACATATGAGTCAAATTTCGTATCAAAGTATTGGTTCAAATCATCACTTAGGTGGGTCAACACATGGTTTGAATGTAATTGGTATGTCAAAACTTGAACAGCAGAATTCTTTCAATGACCCCAAGAGACTGCCAGGTGGATCTGTGTCTCCTGCTGTAAACAATACAGTGTCTCAACAAACTAAAAATGCTTGGCAACCATCAACAAACAAAGAACAAAATCTGGGCTTATTGTCATCTGTTTCTTATGTCAAAAAGGAACCTAGTGACTTGTCTACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGGGTGGTGCTAGTCAAGGAACTGTAAAGGATGAATTTTCAAGAGGTCTTCCAGCACCCCCAAGCAAGCCTCCTACATCTACTGGCTTGCTGCCACAAAGTTCTTCTTCCCCTTCTGTAATGACCCAACTAGGCCCGGGTGTCTCGCTAAGCACTCAGATCCCATCAAATGCTTCTGGAATTGGTGCAAGGACATCTCTTAAAAAGCCTGCTGCTGCCCAAAAGAAACCACATGAAGCACTTGGTTCCTCACCTCCTCCTGCAAATAAAAAACAAAAAACTTCTGGGGGATCTGTAGAACAAAGCATTGAACAACTTAATGATGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCCAAAGAGGATAGTCGAGTGTCAGAAGCTTCTCGAAAGGCTGTGCAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCATGGCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTGTCACTGTGTGTGGAGGAAAGGATGCGTGGGCTGATAAGTAACCTGATTAGAATATCAAAACAGAGGGTTGATTTTGAGAAAACAAGACATCGGACTGTTGTCACTTCAGATGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGAAAGAGTGGGATATAAAACAGGCAGAAGCAGAGAAGATTAGGAAACTACATAATGTTGACAGCAATACTGGAGTTGATGGTGACAAGGAGAAGGACGACGGCCGTGGTAAATCAACAAAGGTGAACAAGGAAGAGGATGAGAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGATGTCAAAATGGCAACTTATGGCTGAGCAAGCCAAGCAGAAACGTGAAGGGGGGGTGGATGTGTCATCTGGTTCTCAACCAGCTAAAGATGTGAACCGCAAATCTTTATCAACATCTGGAAGAAGTACAAAGGATAATCAGGAAGGGGAGAAAAAAGGTTCATCTACTTTTATAGCAAGTTCAGTGGCTAGAAAACTTGGGAGGAGTCATGCCATGGCATCTCAAACTAGAGTAGCTCGAAGCATCTCTGTAAAGGATGTGATTGCAGTCCTGGAGAGGGAACCCCACATGTCTAAATCTCCACTCATTCATCGCTTGTACGAGAGAATTCATTCTGATGCCCCAGTTTAA 2931 0.4265 MILARNFGMRSQYHKFITMKLNSIVVLSRSNRDNECGEVAMDPSIMKLLEDDEDEAMHSGVDVEAFQAALNRDIGGDVSTSQFSGSDAVLSQGSNNTSSQSLSQWPTSNHDSQTDCQKQESKTAQQQDQPSSGVELKQHGSLAEQLHHVTSQDINNPHLSQKQSQDECHQAPALQVSLHNSQAIGIQNSGKDPVLNNEVVKNHNPSSESQYAKLQQMSNQQATVSEQPSSQGNRSTSKQVPFGMLLPILLPQLAKDRAMQLQTLFAKLKKEEIPKDSFVRLMKGIVGDQMLRLALAKVQVQPQTRPNQASAGQQHPMRMPTVGSGASQLNDPHALAEMHQRSMNAAVDQSRMGSSAGQAMESNARKSQELDVKIESQGLQPSQLTSSSSNKIAQETERTSVHIQGLNKQQQQHLHFPSAYGNSGGNYNPFSGTTSSSTSSIKSQSHDSHMSQISYQSIGSNHHLGGSTHGLNVIGMSKLEQQNSFNDPKRLPGGSVSPAVNNTVSQQTKNAWQPSTNKEQNLGLLSSVSYVKKEPSDLSTEQQNRHNLSKLHGYSSVNSAQLEQGGASQGTVKDEFSRGLPAPPSKPPTSTGLLPQSSSSPSVMTQLGPGVSLSTQIPSNASGIGARTSLKKPAAAQKKPHEALGSSPPPANKKQKTSGGSVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAVQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLCVEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVRKEWDIKQAEAEKIRKLHNVDSNTGVDGDKEKDDGRGKSTKVNKEEDEKMRTNAANVAARAAYGGDDMMSKWQLMAEQAKQKREGGVDVSSGSQPAKDVNRKSLSTSGRSTKDNQEGEKKGSSTFIASSVARKLGRSHAMASQTRVARSISVKDVIAVLEREPHMSKSPLIHRLYERIHSDAPV* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2014 976 MobiDBLite consensus disorder prediction 868 916 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 561 664 - -
Gso17g2014 976 CDD TAF4 664 965 IPR007900 GO:0005669|GO:0006352
Gso17g2014 976 Pfam Transcription initiation factor TFIID component TAF4 family 669 965 IPR007900 GO:0005669|GO:0006352
Gso17g2014 976 MobiDBLite consensus disorder prediction 591 626 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 412 447 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 483 520 - -
Gso17g2014 976 Gene3D Histone, subunit A 714 759 IPR009072 GO:0046982
Gso17g2014 976 MobiDBLite consensus disorder prediction 650 664 - -
Gso17g2014 976 PANTHER IP01149P-RELATED 79 397 - -
Gso17g2014 976 PANTHER IP01149P-RELATED 416 971 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 85 140 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 303 329 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 885 903 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 186 238 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 809 844 - -
Gso17g2014 976 Pfam RCD1-SRO-TAF4 (RST) plant domain 235 299 IPR022003 -
Gso17g2014 976 ProSiteProfiles RST domain profile. 233 304 IPR022003 -
Gso17g2014 976 MobiDBLite consensus disorder prediction 303 328 - -
Gso17g2014 976 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 416 971 IPR045144 GO:0005669|GO:0006352
Gso17g2014 976 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 79 397 IPR045144 GO:0005669|GO:0006352
Gso17g2014 976 MobiDBLite consensus disorder prediction 344 365 - -
Gso17g2014 976 MobiDBLite consensus disorder prediction 344 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2014 Gso-Chr17 39518635 39528383 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0752 14 7853796 7863970 Gso17g2014 17 39518635 39528383 GST