LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso17g2008	ATGGCTTCAGCGGAGCAGCCTCTGAAGAAGCGAAAGCTCTACGAGCCTTTACCAGAACCGCCACCGTTTTCGCCGCCGCAACCGCCGCCGCCGGAATCCGAAGCAACCCCTTCCTCTCCGCAAACCCTACCCACGCCGTCGTCCACTCCCCCGCTGTCTCAGGAGGAGATTCTCGCGAAGCGGCGGAACAAGGATGAAATTCGAAGCGTGTACGAAGGTTACAAGCGGATTAAGCGTTGCTTGCTTCGAAAAGACGCTCCCTCCTCCATGTCTGAACTCGAACAGAGTTATCTCGCTCTCATCACTTCTTCCAGAGGTTGTATGAGTGTACAAAGAATTGTGGCGGATCTTATTCCTCGGTACGCATGTCACTGTCCAACTGCTTTGGAAGCTGCAGCTAAAGTTGTTATTAATATGCACAACTTGAGTTTGGCCTTGATCAGCAGAGGAGAGGATTCCAGTGGTATTGCATTTGAAACTGCTAGAGCCTGTATTTGTGGCCTAGCTGATGTTTGCTGCGATGCTTCATCGGTGGCGCCTACATTAGCTGTAATTAGAGGAATTTGCGAAGCAGTTTTTCAGAATGTGCTCACCTTTTTTATAGCCTTATTCGAAGGGAAGGATGTCTTACAGATGGTTGACAAGAATTTCCTGAATATGCAAGATACTCCTGAGGCCTTTTCTGAGTTGAAACAAAAGATTTTAGATGAAGATGAATCTTCATTGACTAAACTGTCCAAGTTGCGCGTGTTATGTCTACTTCGGATATTCTTCTCTTGTCCAAAAGATTTGCTTGCAGCTTGTTTGGATCTCTTTGGCTCTGCCACAAAAGAGGCAACTAATGCCGAAGGACAGCGTTTTCTGAGCCTGGTGACTAGCACATTTGATGATGATAAGGCAGTTCACCTTTTCGAAAGAGCAATTGGTGGATCTAAATCATGTACAGATTCTACTGGGTCAGGCATCAGAGACAATGAGGCTGGTGAGGCAATTATGACTGAAGACAACCATGTTTCTGGTGGTGATTCATCTGTTGGCAAAAGCTGCTTGCTTATGCAGGTCCTTGACAAGGATCCCTTACTGCGGAAATGGATGTTGTGTAGATGTAAGAAGTTGCTTGACTTGCTCTCTGATGTATCACTGGAAATTACGTCAGTACTGCAAGGAATTCTTGGAATGTTTCCTCGACAAACAGATTTGGAGGACTGTCAAGCAGATAGTGATGAAGATAAATCTGATTCTTCAATTTACATGAATAGGAACTACATGGTTCCTAGGATCTCTGAGGAACATGAAAGCATTGGTGAATCATCTGGAAAAGGCAGCAGTTTGAGAGTTCATGTTGGTTCTTCTGATGGTTTTACTGATAAATATGTGATGGATCATAGCTCAGCAGTTCCTCTTGACCATGTTCCTGTGTTAAAAGTGGGTTCACATTACGATAATGGAGTCTCAAAGCCCATGAGCATTGGGGTGGGGGAGGAAGGGAATATGCCCACACCTAGGGACTCGGTAAGCCATCAAATGTTCTCACCTGCTGTTAGAACACCAGTAGACTTTAGGAGCAATTCATTTGAAGGTAGAAATGATTTCCTGAATGTAGAGAAAAATCATGTCTTAAATATGAACTTCAATTCACCTCCGCTGAGATCCTCTAGTGGATCTGTTAGTAATTCTTTGGCATCTCCTAATCATCATTTTATGTCACCAACTGCTTCAACAAAAGGTCAAATTGTCTGGTGCTGTGATGGGGATCCTGCAGCCATGGATATTGTCTCTGCTTCTAAGCAGTTATGGATAGGCTATGTAGGTCCTGATGTGCCTGAAAATCATATTAGGTTTCACTTAGAAAGATTTGGTACTATTGAACAATTTATTTTCTTCCCAGTAAAAGGATTTGCCTTGGTTGAGTACAGAAGGATCATTGACGCAATAAAAACTCGACACTGTTTACCTGGATGTTTTCCTTGCCGTGTAAAATTCATGGATATAGGACTTGGAACTAGGGGTGCAATGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATATTCCTAGTCAATGGGCCAGGGATGAGATCATGCATGAAACAAGGAAGGTGATCCACAAGGGTCCTCTTGCATTCATTGATCTTAGCTGTGAGTTTGCATTACTTATGGAATTTGAAACTCCTGAAGAAGCTGCAACTGTCATGTTGCATTTGAGACAACTACGAAGAGAAAGAAGTAACTACAACCAGCATTTTGGTCCAGGAACAGTTAATGTTGGAATTGGGCATGCTTATATGGATGGTGGAAGGCCTATACCTGCCCCTCCCCCTCCCCCTCCCCCTCCCAATCTTGACCTTAAAGTTAACAACCCTGCTGGATCACCTCATGCTCGAACTCTATCAGGGAGCCCCGCCGATAGCAGTCGAACAAGGATGTCTCACTTGTCTACCTTACTTGCTTCATTGCGCACAAAGTATAATATTAATCAAAACCTAGGTCTCAGTGATAATTATACGATTGGAAATAATTGTCCTCCCATGCGTGAAGAAGATATGGTGCCATCCAGCACTCTGTGCATAACTATTCCACGTAGTAGCTCTTTGTTCCTCACAGATGATGAGTTAATGGCCATTTGCAATCTTGCCATTGGAAACTCTGGATCAATTGTGCAGTTGACACAAACAAACTTGCAGATGGGATGTAGTTGGTTTGTCGAATGTAGTAATGTTGATGGTGCAGTTTCTGTTCTAAAGAATCTCCGTGGTTGTCCAGGATTGTTCTTCCAGATAGAATTCAGCAAACCCGGAAATCAGATTGCTGTACCATTTTCAGTTAAACCAGAGAACAATTCAATGGAGCTTGTATCCCCCAGAATAAATTCAGAAAATCATAATCTGCCTCAGTCAAACTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGCTTGGAGCAAGAAAACCTGATGGTTATGATAATTTGTCACAGGATCCTCATCAAGGAGGTATTGTTCCGCATTCACACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAAATTCAGTCTTCTCCTTTTGTTCGCCCTGTTTATGTTCCTCCTAATGGTCCATGGGATCGTCGGGGAATTAATAATCATTTACCTGTCAGCCAATTCAAGACAGGAGTAATGCCAAATAATTTTCATGGTAATGCTGTTGTCAGTCCTTTTATTCCTGCTTCAGTAACTCCACTTGCTCAGATACAAGGAACTCCAATGCATCCTTATAACCAGCAGGTGCCTCCATCAATTATACCACCACCTTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCACTTCCTCCTTCTCCACCACCTTTACCCCAGGTTCAGCCACCCTTGGTCCCTCCACTGCCTAGTTCTCCTCCTCCCCCTCCTCCTCCACCACTGCCTGTTCAAGAAGCAGTCGATATGGAATGTTCAGGGCAGTCCTTGCTGTATCAATGGCAGGGGAATCTCTGTAAAAGTGGGGTTAATTACTGTACAATTTATGCATGCAAAGCAGATTCAAATATTTGTCGATATTCAAATGCCATACCTGAGCCTGCCGAGTGGCCCTCAAAATTAGACATGACAAAACGAACAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGGTTTCAGGATTTCATATCATACTTGAAGCAGAGGGATTGTGCTGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGTTGCTATTCATTCTCCCCCACTCACTTGAAACGTGCTCTTTGCTTTCTATTGCACATGATCCATCAGATTGCCTCATTGCTTTGGTTCTTCCCAAAGAAACAAACTTTGAGTGGATATGA	3933	0.4386	MASAEQPLKKRKLYEPLPEPPPFSPPQPPPPESEATPSSPQTLPTPSSTPPLSQEEILAKRRNKDEIRSVYEGYKRIKRCLLRKDAPSSMSELEQSYLALITSSRGCMSVQRIVADLIPRYACHCPTALEAAAKVVINMHNLSLALISRGEDSSGIAFETARACICGLADVCCDASSVAPTLAVIRGICEAVFQNVLTFFIALFEGKDVLQMVDKNFLNMQDTPEAFSELKQKILDEDESSLTKLSKLRVLCLLRIFFSCPKDLLAACLDLFGSATKEATNAEGQRFLSLVTSTFDDDKAVHLFERAIGGSKSCTDSTGSGIRDNEAGEAIMTEDNHVSGGDSSVGKSCLLMQVLDKDPLLRKWMLCRCKKLLDLLSDVSLEITSVLQGILGMFPRQTDLEDCQADSDEDKSDSSIYMNRNYMVPRISEEHESIGESSGKGSSLRVHVGSSDGFTDKYVMDHSSAVPLDHVPVLKVGSHYDNGVSKPMSIGVGEEGNMPTPRDSVSHQMFSPAVRTPVDFRSNSFEGRNDFLNVEKNHVLNMNFNSPPLRSSSGSVSNSLASPNHHFMSPTASTKGQIVWCCDGDPAAMDIVSASKQLWIGYVGPDVPENHIRFHLERFGTIEQFIFFPVKGFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDIGLGTRGAMNGVAVGSSSHIYVGNIPSQWARDEIMHETRKVIHKGPLAFIDLSCEFALLMEFETPEEAATVMLHLRQLRRERSNYNQHFGPGTVNVGIGHAYMDGGRPIPAPPPPPPPPNLDLKVNNPAGSPHARTLSGSPADSSRTRMSHLSTLLASLRTKYNINQNLGLSDNYTIGNNCPPMREEDMVPSSTLCITIPRSSSLFLTDDELMAICNLAIGNSGSIVQLTQTNLQMGCSWFVECSNVDGAVSVLKNLRGCPGLFFQIEFSKPGNQIAVPFSVKPENNSMELVSPRINSENHNLPQSNWHFPGSREMSELGARKPDGYDNLSQDPHQGGIVPHSHSGAHGPSIPPPQQIQSSPFVRPVYVPPNGPWDRRGINNHLPVSQFKTGVMPNNFHGNAVVSPFIPASVTPLAQIQGTPMHPYNQQVPPSIIPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPPLPVQEAVDMECSGQSLLYQWQGNLCKSGVNYCTIYACKADSNICRYSNAIPEPAEWPSKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSSSDHKRFQDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAHDPSDCLIALVLPKETNFEWI*	1311

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso17g2008	1310	PANTHER	ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100	1	1309	-	-
	Gso17g2008	1310	MobiDBLite	consensus disorder prediction	794	811	-	-
	Gso17g2008	1310	MobiDBLite	consensus disorder prediction	1092	1146	-	-
	Gso17g2008	1310	SUPERFAMILY	RNA-binding domain, RBD	585	655	IPR035979	GO:0003676
	Gso17g2008	1310	MobiDBLite	consensus disorder prediction	770	786	-	-
	Gso17g2008	1310	PANTHER	NUCLEIC ACID BINDING PROTEIN	1	1309	-	-
	Gso17g2008	1310	Gene3D	-	587	668	IPR012677	-
	Gso17g2008	1310	MobiDBLite	consensus disorder prediction	17	47	-	-
	Gso17g2008	1310	MobiDBLite	consensus disorder prediction	1083	1146	-	-
	Gso17g2008	1310	MobiDBLite	consensus disorder prediction	1	53	-	-
	Gso17g2008	1310	Pfam	SPOC domain	1159	1301	IPR012921	-
	Gso17g2008	1310	MobiDBLite	consensus disorder prediction	982	1024	-	-
	Gso17g2008	1310	MobiDBLite	consensus disorder prediction	767	811	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso17g2008	Gso-Chr17	39428309	39439093	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso14g0759	14	7970653	7981486	Gso17g2008	17	39428309	39439093	GST