Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2003 ATGGGAAAGCGGAACGAAGAAGTGCACTTCGATCAAGATGGTCTGCTCGATCAAGCTCTCGATGCTTTGGACGAAAAAAGGGGTTCCACAAGGGAGAGAGCGTTGTCAGTGATCATTGGGGCATTCACTAGCAACATGCAGCATCATTTTGTTGACAAGAAATTTGCTACTTTATTACATCAGTGCCTTGCTTCAATAAAAAAGGGATCCAAAAAGGCATCTGCAAAGGAGATAGCTTTGGCATCACATGCCATTGGTTTGTTGACCCTGACTGTTGGGTGTAGTGATAATGCACGTGAAATATTTGAGGAATCGGTTCGTCCTCTAGATGAATTTCTCACATCTAAATCACATTTGACAAAAATTCCTTCATTGCTGGAATGCTTGGCTATAATCACATTTGTTGGTGGGAATGGTCTGGAGGAAACAGAGAGATCGATGGACATACTGTGGCGAGTGATTCATCCCAGATTGGGTTCCAATGTAGTTGCAGTCAAACCTTCTGCTCCATTAATAACTGCTGTGGTATCTGCTTGGTCCTTTCTCCTATCTACCATGCGTAATTTGAAGCTAAATTCTAAAAATTGGCAAAATTCAATATCTTATTTATCAAGTCTTCTAGACAAGGAAGACCGGCCTGTGCGTATTGCTGCTGGCGAAGCACTGGCTGTAATTTTTGAGATTGGAATTATAGAGAAATTTTCTGCTGATTCTAAGGGTGCAAGTGATATGAGTCAAGAAGAGATTAATCTGCAGGAAAGTTATACCCATTTACAAGGATTGAAAGGGAAGGTCATCACTCAAGTCAAAAACCTTTCTGTTGAGGCTGGTGGAAAAGGTTCTGCTAAGAAAGATCTGAATAATCAGAGGAACTTGTTCCGAGATATTGTAGAGTTTTTTGAGTGTGGTTACTCTCCTGAAATTTCAATGAAAATTGGTGGTGATTCACTGCAGACATCTTCATGGTCCCAAATGATACAGTTGAACTTTCTCAAGCATTTTTTAGGGGGAGGGTTCATCAAGCATATTCAGGAAAATGAGTTCCTTCAAGATGTATTTAATTTCAAACCAAAGAGAAGATATCTTAATAACAATGAACATCGGATGTCTAGTGGTGAGAAGAGAATGTTTAAGTCTCCAAATTCAGTTCAGAACAAGGCTAGGACCCAATTACTTAATAAGCAACGGTTGTTATCTGAGGGCAGAAACTTGGGTCACTACGCAGCCAATATGGTTGATGACTGA 1245 0.4024 MGKRNEEVHFDQDGLLDQALDALDEKRGSTRERALSVIIGAFTSNMQHHFVDKKFATLLHQCLASIKKGSKKASAKEIALASHAIGLLTLTVGCSDNAREIFEESVRPLDEFLTSKSHLTKIPSLLECLAIITFVGGNGLEETERSMDILWRVIHPRLGSNVVAVKPSAPLITAVVSAWSFLLSTMRNLKLNSKNWQNSISYLSSLLDKEDRPVRIAAGEALAVIFEIGIIEKFSADSKGASDMSQEEINLQESYTHLQGLKGKVITQVKNLSVEAGGKGSAKKDLNNQRNLFRDIVEFFECGYSPEISMKIGGDSLQTSSWSQMIQLNFLKHFLGGGFIKHIQENEFLQDVFNFKPKRRYLNNNEHRMSSGEKRMFKSPNSVQNKARTQLLNKQRLLSEGRNLGHYAANMVDD* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2003 414 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 2-LIKE ISOFORM X1 5 409 - -
Gso17g2003 414 SUPERFAMILY ARM repeat 11 227 IPR016024 -
Gso17g2003 414 Pfam Interferon-related protein conserved region 346 396 IPR006921 -
Gso17g2003 414 Pfam Interferon-related developmental regulator (IFRD) 5 301 IPR007701 -
Gso17g2003 414 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 5 409 IPR039777 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2003 Gso-Chr17 39358917 39365012 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0764 14 8076752 8082821 Gso17g2003 17 39358917 39365012 GST
Gso17g2003 17 39358917 39365012 Gso4g0397 4 3624384 3629425 PCT
Gso17g2003 17 39358917 39365012 Gso6g0375 6 3505872 3510885 PCT
Gso4g0397 4 3624384 3629425 Gso17g2003 17 39358917 39365012 PCT
Gso6g0375 6 3505872 3510885 Gso17g2003 17 39358917 39365012 PCT